Evidence map›Paper›PMID 7491120›Full record

ArticleMutation research1995

The yeast RAD2, but not RAD1, gene is involved in the transcription-coupled repair of thymine glycols.

S A Leadon, S L Barbee, A B Dunn

RetractedAbstract readRetracted Publication
PubMed Publisher
In one paragraph

Article in Mutation research, 1995. The graph could read no effect estimate from its abstract, so it casts no vote on the map. It has been retracted, and should not be counted. Cited by 5 papers.

0numbers the graph read from it
0cells of the map it votes in
5citing papers in PubMed
1.5field-weighted citation impact, top 18% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

5 citing papers in PubMed, 32 citations in OpenAlex.

  1. Article
  2. Review
  3. Article
  4. Article
  5. Article
4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

3 authors at 1 institution in 1 country.

S A LeadonDepartment of Radiation Oncology, University of North Carolina, Chapel Hill 27599, USA.
S L Barbee
A B Dunn
University of North Carolina at Chapel Hill · US

Funding

TRANSCRIPTION COUPLED REPAIR OF EUKARYOTIC CELLSR01CA040453 · NCI · UNIVERSITY OF NORTH CAROLINA CHAPEL HILL · PI LEADON, STEVEN A · 1985 to 2002
$629k
NCI NIH HHS CA40453
6 · The paper itself

Abstract

Transcription-coupled repair of H2O2-induced thymine glycols and UV-induced pyrimidine dimers has been shown to occur in the yeast Saccharomyces cerevisiae. In order to determine whether the preferential repair of thymine glycols is carried out by the same nucleotide excision repair complex that removes pyrimidine dimers, we examined the repair of thymine glycols in two yeast mutants, rad1 delta and rad2 delta, in which the nucleotide excision repair pathway was disrupted. We find that in both wild-type and a rad1 delta mutant, repair of thymine glycols occurs faster on the transcribed strand of the GAL7 gene than on the nontranscribed strand. This indicates that transcription-coupled repair can occur in the absence of nucleotide excision repair and that repair of oxidative DNA damage initiated by an N-glycosylase can be coupled to transcription. In contrast, the initial rate of repair of thymine glycols on the transcribed strand of the GAL7 gene in a rad2 delta mutant is significantly slower than that for the wild-type cells, with kinetics similar to that of the nontranscribed strand. However, by 60 min post-treatment, the amount of repair on the transcribed strand in the rad2 delta eventually reaches that of the wild-type cells. We conclude that repair of oxidative DNA damage, such as thymine glycols, can be coupled to transcription and that RAD2 facilitates transcription-coupled repair of oxidative DNA damage in yeast.

Indexed as

DNA-Binding ProteinsDNA RepairEndodeoxyribonucleasesGenes, FungalSaccharomyces cerevisiae ProteinsTranscription, GeneticDNA ProbesDNA Repair EnzymesEndonucleasesEnzyme-Linked Immunosorbent AssayFungal ProteinsMutationSaccharomyces cerevisiaeThymineTime FactorsDNA-Binding ProteinsDNA ProbesDNA Repair EnzymesEndodeoxyribonucleasesEndonucleasesFungal ProteinsRAD1 protein, S cerevisiaeRAD2 protein, S cerevisiaeSaccharomyces cerevisiae ProteinsThyminethymine glycol

Identifiers

PMID7491120
OpenAlexW2015881633

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.