Evidence map›Paper›PMID 6501417›Full record

ArticleThe Journal of cell biology1984

Diffusion coefficient of fluorescein-labeled tubulin in the cytoplasm of embryonic cells of a sea urchin: video image analysis of fluorescence redistribution after photobleaching.

E D Salmon, W M Saxton, R J Leslie, M L Karow, J R McIntosh

Open access · bronzeAbstract read
In one paragraph

Article in The Journal of cell biology, 1984. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 40 papers.

0numbers the graph read from it
0cells of the map it votes in
40citing papers in PubMed
13.6field-weighted citation impact, top 1% of its field
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

40 citing papers in PubMed, 119 citations in OpenAlex.

  1. Microtubule nucleation complex behavior is critical for cortical array homogeneityProceedings of the National Academy of Sciences of the United States of America · 2022
    Article
  2. Article
  3. Article
  4. Persistent growth of microtubules at low density.Molecular biology of the cell · 2021
    Article
  5. Review
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  7. Article
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  10. Organization of early frog embryos by chemical waves emanating from centrosomes.Philosophical transactions of the Royal Society of London. Series B, Biological sciences · 2014
    Review
  11. Article
  12. Article
  13. Article
  14. From microscopy data to in silico environments for in vivo-oriented simulations.EURASIP journal on bioinformatics & systems biology · 2012
    Article
  15. Article
  16. Article
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  18. Model for anaphase B: role of three mitotic motors in a switch from poleward flux to spindle elongation.Proceedings of the National Academy of Sciences of the United States of America · 2004
    Article
  19. Article
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4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors.

E D Salmon
W M Saxton
R J Leslie
M L Karow
J R McIntosh

Funding

MECHANISMS OF MITOTIC SPINDLE ASSEMBLY AND FUNCTIONR37GM024364 · NIGMS · UNIV OF NORTH CAROLINA CHAPEL HILL · PI SALMON, EDWARD D. · 2004 to 2013
$4.1M
MECHANISMS OF MITOTIC SPINDLE ASSEMBLY AND FUNCTIONR01GM024364 · NIGMS · UNIV OF NORTH CAROLINA CHAPEL HILL · PI BLOOM, KERRY S, SALMON, EDWARD D. · 1985 to 2018
$3.1M
NIGMS NIH HHS GM-24364NIGMS NIH HHS GM-31213
6 · The paper itself

Abstract

The diffusion coefficient of tubulin has been measured in the cytoplasm of eggs and embryos of the sea urchin Lytechinus variegatus. We have used brain tubulin, conjugated to dichlorotriazinyl-aminofluorescein, to inject eggs and embryos. The resulting distributions of fluorescence were perturbed by bleaching with a microbeam of light from the 488-nm line of an argon ion laser. Fluorescence redistribution after photobleaching was monitored with a sensitive video camera and photography of the television-generated image. With standard photometric methods, we have calibrated this recording system and measured the rates of fluorescence redistribution for tubulin, conjugated to dichlorotriazinyl-aminofluorescein, not incorporated into the mitotic spindle. The diffusion coefficient (D) was calculated from these data using Fick's second law of diffusion and a digital method for analysis of the photometric curves. We have tested our method by determining D for bovine serum albumin (BSA) under conditions where the value is already known and by measuring D for fluorescein-labeled BSA in sea urchin eggs with a standard apparatus for monitoring fluorescence redistribution after photobleaching. The values agree to within experimental error. Dcytoplasmtubulin = 5.9 +/- 2.2 X 10(-8) cm2/s; DcytoplasmBSA = 8.6 +/- 2.0 X 10(-8) cm2/s. Because DH2OBSA = 68 X 10(-8) cm2/s, these data suggest that the viscosity of sea urchin cytoplasm for protein is about eight times that of water and that most of the tubulin of the sea urchin cytoplasm exists as a dimer or small oligomer, which is unbound to structures that would impede its diffusion. Values and limitations of our method are discussed, and we draw attention to both the variations in D for single proteins in different cells and the importance of D for the upper limit to the rates of polymerization reactions.

Indexed as

AnimalsCattleDiffusionFemaleFluoresceinsFluorescent DyesKineticsLightMicrotubule ProteinsOocytesSea UrchinsTubulin5-((4,6-dichloro-1,3,5-triazin-2-yl)amino)fluoresceinFluoresceinsFluorescent DyesMicrotubule ProteinsTubulin

Identifiers

PMID6501417
PMCPMC2113538
OpenAlexW2087167072

What OpenQuestion holds

Textmetadata
LicenceCC BY-NC-SA
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.