Evidence map›Paper›PMID 42919027›Full record

ArticleMethods in molecular biology (Clifton, N.J.)2027

SNP Discovery of 3 K RICE Panel for Specific Traits.

Veera Ranjani Rajagopalan, R C Sivabharathi, Raveendran Muthurajan, Sudha Manickam

Abstract read
PubMed Publisher
In one paragraph

Article in Methods in molecular biology (Clifton, N.J.), 2027. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors.

Veera Ranjani RajagopalanDepartment of Plant Biotechnology, Centre for Plant Molecular Biology and Biotechnology, Tamil Nadu Agricultural University, Coimbatore, India.
R C SivabharathiDepartment of Plant Biotechnology, Centre for Plant Molecular Biology and Biotechnology, Tamil Nadu Agricultural University, Coimbatore, India.
Raveendran MuthurajanDepartment of Plant Biotechnology, Centre for Plant Molecular Biology and Biotechnology, Tamil Nadu Agricultural University, Coimbatore, India.
Sudha ManickamDepartment of Plant Biotechnology, Centre for Plant Molecular Biology and Biotechnology, Tamil Nadu Agricultural University, Coimbatore, India. sudhatamil@gmail.com.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Rice is the most important staple food crop cultivated by millions of small-holder farmers. The effective utilization of extensive genetic diversity leads to sustainable rice production. The 3000 Rice Genomes Project is a publicly accessible giga-dataset of genomic sequences with an average coverage depth of 14×, derived from 3000 rice accessions that represent global genetic and functional diversity. Seeds of these accessions are conserved in the International Rice Genebank Collection, and these resources constitute an unprecedented platform for advancing rice science and modern breeding strategies. A key challenge with the available dataset is the need for comprehensive, systematic mining to associate genomic variation with functional traits. SNP discovery from the 3 K rice panel for specific traits provides a robust foundation for dissecting genetic diversity, population structure, and evolutionary relationships in cultivated rice, ultimately enabling the creation of new varieties to support the world population.

Indexed as

Genome, PlantGenomicsOryzaPolymorphism, Single NucleotideGenetic VariationPhenotypePlant BreedingQuantitative Trait LociAmino acidGenomeRiceSequenceVariations

Identifiers

PMID42919027

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.