Evidence map›Paper›PMID 42911495›Full record

ArticleMethods in molecular biology (Clifton, N.J.)2027

Measuring the Proximity of Nuclear lncRNAs to Nuclear Bodies.

Sarah E Hasenson, Yaron Shav-Tal

Abstract read
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In one paragraph

Article in Methods in molecular biology (Clifton, N.J.), 2027. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

2 authors.

Sarah E HasensonThe Mina and Everard Goodman Faculty of Life Sciences and Institute of Nanotechnology, Bar-Ilan University, Ramat Gan, Israel.
Yaron Shav-TalThe Mina and Everard Goodman Faculty of Life Sciences and Institute of Nanotechnology, Bar-Ilan University, Ramat Gan, Israel. Yaron.Shav-Tal@biu.ac.il.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Long noncoding RNAs (lncRNAs) are classified as RNAs longer than 200 nucleotides, which do not code for proteins. The precise functions of lncRNAs in the cell are not always well understood, but it is believed that they often localize to their site of action. Some lncRNAs can associate with nuclear bodies under different conditions, and so it is of interest to measure lncRNA localization in relation to different nuclear bodies under different conditions. In this protocol, we describe a method by which to measure the relative intensity of a specific RNA in the vicinity of nuclear bodies known as nuclear speckles.

Indexed as

Cell NucleusRNA, Long NoncodingAnimalsHumansIn Situ Hybridization, FluorescenceRNA, Long NoncodingGene expressionImage processing and analysisLive cell imagingNuclear organizationRNASingle-molecule FISH

Identifiers

PMID42911495

What OpenQuestion holds

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Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.