Evidence map›Paper›PMID 42907846›Full record

ArticleBiology direct2026

Rapid turnover of sex chromosomes is associated with speciation in Neotropical armored catfish Harttia (Siluriformes, Loricariidae).

Francisco de Menezes Cavalcante Sassi, Fernando Henrique Santos de Souza, Manolo Fernandez Perez, Foyez Shams, Tariq Ezaz, Geize Aparecida Deon, Thomas Liehr, Luohao Xu, Marcelo de Bello Cioffi

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Article in Biology direct, 2026. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

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1 · What the graph read from it

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3 · Its place in the literature

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4 · The record

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5 · Who and what money

Authors and funding

9 authors.

Francisco de Menezes Cavalcante Sassi *Aquaculture Center of São Paulo State University (CAUNESP), Jaboticabal, 14884-900, SP, Brazil.ORCID http://orcid.org/0000-0001-5699-5789
Fernando Henrique Santos de Souza *Laboratory of Evolutionary Cytogenetics, Universidade Federal de São Carlos, São Carlos, 13565-905, SP, Brazil.ORCID http://orcid.org/0000-0001-6209-6296
Manolo Fernandez PerezReal Jardín Botánico - RJB-CSIC, Madrid, 28014, Spain.ORCID http://orcid.org/0000-0002-4642-7793
Foyez ShamsInstitute for Applied Ecology, University of Canberra, Canberra, ACT, 2617, Australia.ORCID http://orcid.org/0000-0002-5919-0617
Tariq EzazInstitute for Applied Ecology, University of Canberra, Canberra, ACT, 2617, Australia.ORCID http://orcid.org/0000-0003-4763-1347
Geize Aparecida DeonLaboratory of Evolutionary Cytogenetics, Universidade Federal de São Carlos, São Carlos, 13565-905, SP, Brazil.ORCID http://orcid.org/0000-0002-3374-2233
Thomas LiehrJena University Hospital, 07747, Jena, Jena, Germany. thomas.liehr@med-uni.jena.de.ORCID http://orcid.org/0000-0003-1672-3054
Luohao Xu *MOE Key Laboratory of Freshwater Fish Reproduction and Development, College of Life Sciences, Southwest University, Chongqing, 400715, China.ORCID http://orcid.org/0000-0002-3714-8047
Marcelo de Bello Cioffi *Laboratory of Evolutionary Cytogenetics, Universidade Federal de São Carlos, São Carlos, 13565-905, SP, Brazil.ORCID http://orcid.org/0000-0003-4340-1464

Funding

Fundação de Amparo à Pesquisa do Estado de São Paulo 2020/02681-9Fundação de Amparo à Pesquisa do Estado de São Paulo 2024/12644-4
6 · The paper itself

Abstract

backgroundThe Neotropical armored catfish genus Harttia is an exceptional model for studying sex chromosome evolution, as it harbors the highest diversity of multiple sex chromosome systems known among fishes. However, the evolutionary history of these systems and their contribution to lineage diversification remain unresolved. We generated genome-wide DArTseq data for 17 Harttia species to investigate the origins of sex chromosome turnover, reconstruct phylogenetic and biogeographic history, identify sex-linked markers, and test whether multiple sex chromosomes are associated with increased speciation.

resultsGenome-wide SNP analyses resolved three major Harttia clades and dated their diversification to the last 10 million years, coinciding with major Neotropical drainage rearrangements. We identified 443 candidate sex-linked markers that suggest independent origins for the X₁X₂Y and XY₁Y₂ multiple sex chromosome systems. Ancestral chromosome-number reconstruction supported an ancestral karyotype of 2n = 58, while integration of candidate sex-linked markers with previous cytogenetic evidence is consistent with an ancestral homomorphic XY system followed by independent chromosome rearrangements generating multiple sex chromosomes in distinct lineages. State-dependent diversification analyses revealed significantly higher speciation rates in clades carrying multiple sex chromosomes than in those with simple systems, suggesting a close association between rapid sex chromosome turnover and lineage diversification.

conclusionsOur results provide the first genome-wide evolutionary framework for Harttia, suggesting that multiple sex chromosome systems may be associated with elevated diversification in some Harttia lineages, while highlighting the need for broader genomic and taxonomic sampling to test this association. These findings identify Harttia as a powerful model for investigating how sex chromosome turnover, chromosome evolution, and landscape history jointly shape biodiversity.

Indexed as

CatfishesGenetic SpeciationSex ChromosomesAnimalsEvolution, MolecularMalePhylogenyPolymorphism, Single NucleotideDArT-seqPhylogeneticsProbabilistic modelingSex-linked markersSNP

Identifiers

PMID42907846
PMCPMC13685301

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.