Evidence map›Paper›PMID 42907771›Full record

ArticleBMC neuroscience2026

Whole-transcriptome sequencing reveals Alzheimer's disease-associated ceRNA regulatory networks and downstream pathways.

KeFei Duan, Fangfang Zhan, Yaodan Zhang, Xinghang Wang, Gaoteng Lin, Xiaoyi Zhao, Dan Yu, Shida Duan, Yuan Ma

Abstract read
In one paragraph

Article in BMC neuroscience, 2026. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

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1 · What the graph read from it

What it found

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The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

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3 · Its place in the literature

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4 · The record

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5 · Who and what money

Authors and funding

9 authors.

KeFei Duan *Cerebrovascular Diseases Department, Beijing Anzhen Hospital, Capital Medical University, Beijing, 100000, China.
Fangfang Zhan *Department of Rehabilitation, The First Affiliated Hospital of Fujian Medical University, Fuzhou, Fujian, 350000, China.
Yaodan Zhang *Department of Geriatrics, Henan Provincial People's Hospital, People's Hospital of Zhengzhou University, Zhengzhou, 450000, China.
Xinghang Wang *The Great Bay Area Center for Brain Research, Southern Medical University, Guangzhou, 510515, China.
Gaoteng LinDepartment of Urology, The First Affiliated Hospital of Jinan University, Guangzhou, 510630, China.
Xiaoyi ZhaoDepartment of Nephrology, Affiliated Hospital of Chifeng University, Chifeng, 024000, China.
Dan YuDepartment of Imaging, Affiliated Hospital of Chifeng University, Chifeng, 024000, China.
Shida DuanSchool of Software, Henan University, Kaifeng, 475000, China.
Yuan MaDepartment of Urology, Beijing Jishuitan Hospital, Capital Medical University, No. 31, Xinjiekou East Street, Xicheng District, Beijing, 100010, China. yuanmajst@163.com.

Funding

National Natural Science Foundation of China 92163213, 81970085 and 82471301Tianjin science and Technology program 17ZXMFSY00080
6 · The paper itself

Abstract

objectiveAlzheimer's disease (AD) molecular mechanisms remain unclear, and effective therapies are lacking. This study employed whole-transcriptome sequencing to investigate the expression profiles of circRNAs, lncRNAs, miRNAs, and mRNAs in the hippocampus of APP/PS1 transgenic mice, aiming to identify ceRNA regulatory networks and clarify their roles in AD pathogenesis.

methodsDifferentially expressed RNAs were integrated into ceRNA networks, and programmed cell death-related pathways were analyzed using GO and KEGG. The computationally predicted circRNA_13083/miR-298-5p/CD14 axis was preliminarily evaluated in vitro using siRNA-mediated CD14 knockdown in microglial and neuronal AD models. Expression of CD14, NF-κB components, and NLRP3 markers was measured by qRT-PCR, while secreted IL-1β and IL-18 protein levels were quantified via ELISA. Neuronal survival was assessed via CCK-8 assays.

resultsTranscriptome analysis revealed 376 differentially expressed mRNAs, 491 lncRNAs, 5,253 circRNAs, and 21 miRNAs, which formed extensive ceRNA interaction networks. Functional enrichment highlighted programmed cell death pathways, including NF-κB and inflammasome signaling. The circRNA_13083/miR-298-5p/CD14 axis emerged as a key regulatory node. qRT-PCR confirmed elevated CD14 expression in AD models. CD14 knockdown significantly attenuated Aβ1-42-induced NF-κB activation, NLRP3 inflammasome assembly, and proinflammatory cytokine release. Conditioned medium transfer experiments further demonstrated that CD14 silencing alleviated microglia-mediated neuronal damage and improved HT-22 cell survival.

conclusionWhole-transcriptome sequencing uncovered extensive ceRNA regulatory networks in AD hippocampus, with the circRNA_13083/miR-298-5p/CD14 axis potentially implicated in neuroinflammation and programmed cell death through NF-κB signaling. Silencing CD14 mitigates microglial activation and neuronal injury, highlighting its potential as a therapeutic target for AD.

Indexed as

Alzheimer DiseaseGene Regulatory NetworksHippocampusTranscriptomeAnimalsGene Expression ProfilingMiceMice, TransgenicMicrogliaMicroRNAsNF-kappa BRNA, CircularRNA, Competitive EndogenousRNA, MessengerSignal TransductionMicroRNAsNF-kappa BRNA, CircularRNA, Competitive EndogenousRNA, MessengerAlzheimer’s diseaseCD14/NF-κB signalingceRNA networkWhole-transcriptome sequencing

Identifiers

PMID42907771
PMCPMC13685357

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.