Evidence map›Paper›PMID 42907652›Full record

ReviewAdvances in experimental medicine and biology2026

Pulse SILAC Approaches to the Measurement of Cellular Dynamics.

Justin Snider, Daifeng Wang, Daniel F Bogenhagen, John D Haley

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In one paragraph

Review in Advances in experimental medicine and biology, 2026. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors.

Justin SniderBiological Mass Spectrometry Center, Stony Brook University School of Medicine, Stony Brook, NY, USA.
Daifeng WangDepartment of Biomedical Informatics, Stony Brook University School of Medicine, Stony Brook, NY, USA.
Daniel F BogenhagenStony Brook Cancer Center, Stony Brook University School of Medicine, Stony Brook, NY, USA. daniel.bogenhagen@stonybrook.edu.
John D HaleyStony Brook Cancer Center, Stony Brook University School of Medicine, Stony Brook, NY, 11794, USA. john.haley@stonybrookmedicine.edu.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The global measurement of assembly and turnover of protein-containing complexes within cells has advanced with the development of pulse stable isotope labelled amino acid approaches. Stable isotope labeling with amino acids in cell culture (SILAC) allows the incorporation of "light" 12-carbon amino acids or "heavy" 13-carbon amino acids into cells or organisms and the quantitation of proteins and peptides containing these amino acid tags using mass spectrometry. The use of these labels in pulse or pulse-chase scenarios has enabled measurements of macromolecular dynamics in cells, on time scales of several hours. Here, we review advances with this approach and alternative or parallel strategies. We also examine the statistical considerations impacting datasets detailing mitochondrial assembly, to highlight key parameters in establishing significance and reproducibility.

Indexed as

Amino AcidsIsotope LabelingProteomicsAnimalsHumansMass SpectrometryMitochondriaAmino Acids

Identifiers

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.