Evidence map›Paper›PMID 42903498›Full record

ArticlehLife2025

Metagenomic mining reveals novel viral histones in dsDNA viruses.

Yang Liu, Zhuru Hou, Wanshan Hao, Shaoqing Cui, Haibo Wang, Yue Liu

Abstract read
In one paragraph

Article in hLife, 2025. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors.

Yang LiuState Key Laboratory for Diagnosis and Treatment of Infectious Diseases of the First Affiliated Hospital and Department of Microbiology, Zhejiang University School of Medicine, Zhejiang, China.
Zhuru HouState Key Laboratory for Diagnosis and Treatment of Infectious Diseases of the First Affiliated Hospital and Department of Microbiology, Zhejiang University School of Medicine, Zhejiang, China.
Wanshan HaoCancer Institute (Key Laboratory of Cancer Prevention and Intervention, China National Ministry of Education) of the Second Affiliated Hospital and Institute of Translational Medicine, Zhejiang University School of Medicine, Zhejiang, China.
Shaoqing CuiDepartment of Biosystems Engineering and Food Science, Zhejiang University, Zhejiang, China.
Haibo WangCancer Institute (Key Laboratory of Cancer Prevention and Intervention, China National Ministry of Education) of the Second Affiliated Hospital and Institute of Translational Medicine, Zhejiang University School of Medicine, Zhejiang, China.
Yue LiuState Key Laboratory for Diagnosis and Treatment of Infectious Diseases of the First Affiliated Hospital and Department of Microbiology, Zhejiang University School of Medicine, Zhejiang, China.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The compaction of genomic DNA into nucleosomes with the help of histones has long been considered a fundamental feature exclusive to eukaryotic cells. However, it was recently shown that archaea and bacteria also encode histones. A complex picture has emerged with more recent discoveries of eukaryotic-like histones within one phylum of double-stranded DNA (dsDNA) viruses. Nevertheless, the extent to which other dsDNA viruses encode histones remains largely unexplored. Here, we conducted a metagenomic survey of viral histones that were further clustered based on sequence and predicted structural similarities. We identified over 1500 viral histones and histone-fold proteins, including previously undescribed proteins found in the viral class Caudoviricetes. Structural predictions and

Indexed as

Caudoviriceteschromatin-associated factorsdouble-stranded DNA viruseshistone-fold proteinsviral histonesviral nucleosome

Identifiers

PMID42903498
PMCPMC13681535

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.