Evidence map›Paper›PMID 42899588›Full record

ArticleBiochemistry2026

Phosphorylation by the PknB Serine/Threonine Kinase Stimulates Dimer Formation by WalR.

Marina Suppi, Ian R Monk, Liam K R Sharkey, Nichollas E Scott, Dweipayan Goswami, Aakash Natarajan, Stephanie Tan, Katharine Myler, Sheila Marie Pimentel-Elardo, Timothy P Stinear and 2 more

Abstract read
In one paragraph

Article in Biochemistry, 2026. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors.

Marina SuppiDepartment of Biochemistry, Temerty Faculty of Medicine, University of Toronto, 661 University Avenue, Toronto, OntarioM5G 1M1, Canada.ORCID 0000-0002-9042-6659
Ian R MonkDepartment of Microbiology and Immunology, Doherty Institute for Infection and Immunity, University of Melbourne, Melbourne, Victoria3000, Australia.
Liam K R SharkeyDepartment of Microbiology and Immunology, Doherty Institute for Infection and Immunity, University of Melbourne, Melbourne, Victoria3000, Australia.
Nichollas E ScottDepartment of Microbiology and Immunology, Doherty Institute for Infection and Immunity, University of Melbourne, Melbourne, Victoria3000, Australia.ORCID 0000-0003-2556-8316
Dweipayan GoswamiDepartment of Microbiology and Immunology, Doherty Institute for Infection and Immunity, University of Melbourne, Melbourne, Victoria3000, Australia.
Aakash NatarajanDepartment of Biochemistry, Temerty Faculty of Medicine, University of Toronto, 661 University Avenue, Toronto, OntarioM5G 1M1, Canada.
Stephanie TanDepartment of Biochemistry, Temerty Faculty of Medicine, University of Toronto, 661 University Avenue, Toronto, OntarioM5G 1M1, Canada.
Katharine MylerDepartment of Biochemistry, Temerty Faculty of Medicine, University of Toronto, 661 University Avenue, Toronto, OntarioM5G 1M1, Canada.
Sheila Marie Pimentel-ElardoDepartment of Biochemistry, Temerty Faculty of Medicine, University of Toronto, 661 University Avenue, Toronto, OntarioM5G 1M1, Canada.
Timothy P StinearDepartment of Microbiology and Immunology, Doherty Institute for Infection and Immunity, University of Melbourne, Melbourne, Victoria3000, Australia.ORCID 0000-0003-0150-123X
Sacha J PidotDepartment of Microbiology and Immunology, Doherty Institute for Infection and Immunity, University of Melbourne, Melbourne, Victoria3000, Australia.ORCID 0000-0003-1202-6614
Justin R NodwellDepartment of Biochemistry, Temerty Faculty of Medicine, University of Toronto, 661 University Avenue, Toronto, OntarioM5G 1M1, Canada.ORCID 0000-0001-7909-1803

Funding

Australian Research Council DP230102668CIHR 202209National Health and Medical Research Council GNT2021638University of Melbourne NAUniversity of Toronto NA
6 · The paper itself

Abstract

WalKR is a two-component system that regulates cell wall homeostasis and other processes in low-GC Gram-positive bacteria. It is essential for viability in Staphylococcus aureus and regulates genes that encode the autolysins and other critical proteins. The sensor kinase WalK phosphorylates WalR at the aspartic acid residue 53 (D53) in the receiver domain, stimulating promoter DNA binding. Unlike most response regulators, WalR is reported to have a second kinase, the serine/threonine kinase PknB, which phosphorylates the receiver domain at the threonine residue 101. We previously reported that a walR mutation that changed T101 to a methionine conferred low-level resistance to vancomycin and greatly increased susceptibility to tunicamycin along with several other phenotypic traits. In this work, we demonstrate similarities between pknB null and the WalRT101M mutants. A combination of in vitro and in vivo data supports the idea that PknB interacts with WalR in living cells (consistent with similar experiments in Bacillus subtilis) and that this likely involves phosphorylation of WalR at T101. Using in silico modeling, we identified a possible intermolecular hydrogen bond between the T101 phosphate group and E108. This would have the effect of stabilizing the WalR dimerization interface. Consistent with this, we find that T101 is important for WalR dimer formation in vivo. The primary activation of WalR is clearly phosphorylation at D53 by WalK. However, our data suggest that PknB serves as a second potentiating input stabilizing the WalR dimer.

Indexed as

Bacterial ProteinsProtein Serine-Threonine KinasesStaphylococcus aureusBacillus subtilisModels, MolecularPhosphorylationProtein MultimerizationBacterial ProteinsProtein Serine-Threonine Kinases

Identifiers

PMID42899588
PMCPMC13689823

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.