Evidence map›Paper›PMID 42897308›Full record

ArticleEMBO reports2026

ALYREF binds to poly-ADP-ribose at double strand breaks impairing repair in tumoral cells.

Cristina Guillén-Mendoza, Sonia Silva, Mar Bustamante-Sequeiros, Sara Priego Moreno, Sandra Trujillo-Sierra, Iván Núñez-Martín, Lillian M Eliaz, Sonia Barroso, Noelia Gil-Lanza, Leire Asua and 5 more

Abstract read
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In one paragraph

Article in EMBO reports, 2026. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

15 authors.

Cristina Guillén-MendozaCentro Andaluz de Biología Molecular y Medicina Regenerativa-CABIMER, Universidad de Sevilla-CSIC-Universidad Pablo de Olavide, Seville, Spain.ORCID http://orcid.org/0000-0003-4396-4865
Sonia SilvaCentro Andaluz de Biología Molecular y Medicina Regenerativa-CABIMER, Universidad de Sevilla-CSIC-Universidad Pablo de Olavide, Seville, Spain.ORCID http://orcid.org/0000-0003-3700-3072
Mar Bustamante-SequeirosCentro Andaluz de Biología Molecular y Medicina Regenerativa-CABIMER, Universidad de Sevilla-CSIC-Universidad Pablo de Olavide, Seville, Spain.ORCID http://orcid.org/0000-0002-2396-4756
Sara Priego MorenoCentro Andaluz de Biología Molecular y Medicina Regenerativa-CABIMER, Universidad de Sevilla-CSIC-Universidad Pablo de Olavide, Seville, Spain.ORCID http://orcid.org/0000-0001-9168-4302
Sandra Trujillo-SierraCentro Andaluz de Biología Molecular y Medicina Regenerativa-CABIMER, Universidad de Sevilla-CSIC-Universidad Pablo de Olavide, Seville, Spain.ORCID http://orcid.org/0009-0004-5563-6281
Iván Núñez-MartínCentro Andaluz de Biología Molecular y Medicina Regenerativa-CABIMER, Universidad de Sevilla-CSIC-Universidad Pablo de Olavide, Seville, Spain.ORCID http://orcid.org/0000-0002-3306-9608
Lillian M EliazDepartment of Chemistry and Biochemistry, Texas State University, San Marcos, TX, USA.ORCID http://orcid.org/0009-0000-4364-8075
Sonia BarrosoCentro Andaluz de Biología Molecular y Medicina Regenerativa-CABIMER, Universidad de Sevilla-CSIC-Universidad Pablo de Olavide, Seville, Spain.ORCID http://orcid.org/0000-0002-0062-2016
Noelia Gil-LanzaDepartamento de Genética, Microbiología i Estadística, Facultad de Biología, Universidad de Barcelona, Barcelona, Spain.
Leire AsuaDepartamento de Genética, Microbiología i Estadística, Facultad de Biología, Universidad de Barcelona, Barcelona, Spain.ORCID http://orcid.org/0009-0005-6028-8856
Belén Gómez-GonzálezCentro Andaluz de Biología Molecular y Medicina Regenerativa-CABIMER, Universidad de Sevilla-CSIC-Universidad Pablo de Olavide, Seville, Spain.ORCID http://orcid.org/0000-0003-1655-8407
Aleix Bayona-FeliuDepartamento de Genética, Microbiología i Estadística, Facultad de Biología, Universidad de Barcelona, Barcelona, Spain.ORCID http://orcid.org/0000-0002-7412-1652
Xiaoyu XueDepartment of Chemistry and Biochemistry, Texas State University, San Marcos, TX, USA.ORCID http://orcid.org/0000-0001-9654-6566
Rosa LunaCentro Andaluz de Biología Molecular y Medicina Regenerativa-CABIMER, Universidad de Sevilla-CSIC-Universidad Pablo de Olavide, Seville, Spain.ORCID http://orcid.org/0000-0002-6131-6610
Andrés AguileraCentro Andaluz de Biología Molecular y Medicina Regenerativa-CABIMER, Universidad de Sevilla-CSIC-Universidad Pablo de Olavide, Seville, Spain. aguilo@us.es.ORCID http://orcid.org/0000-0003-4782-1714

Funding

Roles of the human UAP56 helicase in co-transcriptional R-loop resolution and genome maintenanceR15GM139135 · NIGMS · TEXAS STATE UNIVERSITY · PI XUE, XIAOYU · 2020 to 2020
$436k
Caixa Research Foundation LCF/PR/HR22/52420014EC | European Research Council (ERC) ERC2014 AdG669898 TARLOOPFundacion de Investigacion de la Universidad de Sevilla FIUS22/0178MICIU/AEI/10.13039/501100011033 "ERDF A way of making Europe" PID2022/PID2022-138251NB-I00National Institute of General Medical Sciences of NIH R15GM139135Spanish Ministry of Education, Culture and Sports Predoctoral FPU contractSpanish Ministry of Science and Innovation Postdoctoral-Juan de la Cierva-contractSpanish Ministry of Science and Innovation Ramon y Cajal-Contract
6 · The paper itself

Abstract

DNA-RNA hybrids cause genome instability by promoting transcription-replication conflicts. However, as they are stimulated at double-stranded breaks (DSBs), they can also impact DSB repair. We investigated whether the RNA chaperon ALYREF and its RNA helicase partner UAP56/DDX39B, both of which regulate RNA biogenesis and R-loops, also act at DSBs. We found that ALYREF, but not UAP56/DDX39B, is recruited to DSBs. Recruitment is partially dependent on transcription and hybrids, and fully dependent on polyADP-ribose (PAR). Consistently, we show that ALYREF, but not UAP56/DDX39B, binds PAR in vitro. Notably, ALYREF overexpression delays DSB repair by retaining PAR levels and interfering with the loading dynamics of early DSB repair factors that regulate DNA resection. Interestingly, we detect high ALYREF levels in numerous cancer subtypes by database analysis. We propose that ALYREF, when overexpressed, induces genome instability in tumoral cells by interfering with DSB repair.

Identifiers

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.