Evidence map›Paper›PMID 42889065›Full record

ArticleFrontiers in cellular and infection microbiology2026

Transcriptomic evidence of an IFN-gamma-associated inflammatory state in active visceral leishmaniasis: an exploratory comparison with pediatric HLH.

Taoli Suo, Jing Zhang, Yanli Chen, Hongyu Shi, Haiyan Lu

Abstract readComparative Study
In one paragraph

Article in Frontiers in cellular and infection microbiology, 2026. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

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3 · Its place in the literature

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4 · The record

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5 · Who and what money

Authors and funding

5 authors.

Taoli SuoDepartment of Hematology, Children's Hospital of Shanxi, Women Health Center of Shanxi, Taiyuan, Shanxi, China.
Jing ZhangDepartment of Hematology, Children's Hospital of Shanxi, Women Health Center of Shanxi, Taiyuan, Shanxi, China.
Yanli ChenDepartment of Hematology, Children's Hospital of Shanxi, Women Health Center of Shanxi, Taiyuan, Shanxi, China.
Hongyu ShiDepartment of Hematology, Children's Hospital of Shanxi, Women Health Center of Shanxi, Taiyuan, Shanxi, China.
Haiyan LuDepartment of Hematology, Children's Hospital of Shanxi, Women Health Center of Shanxi, Taiyuan, Shanxi, China.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Background: Visceral leishmaniasis (VL) can progress to secondary hemophagocytic lymphohistiocytosis (HLH), but transcriptomic similarities between active VL and pediatric HLH remain uncertain. Methods: We integrated VL whole-blood expression data (GSE125992), sorted CD68-positive monocyte bulk-expression data from pediatric HLH and severe sepsis (GSE150707), and supportive Leishmania-infected mouse spleen single-cell data (GSE240385). Differential expression, pathway enrichment, an exploratory 132-gene HLH-versus-sepsis-derived ssGSEA score, FARDEEP-LM22 deconvolution, signature-excluded WGCNA, CellChat, and a refitted three-gene classifier were evaluated. Results: Active VL showed IFN-gamma-associated expression changes, including higher CXCL9 and CXCL10. The exploratory 132-gene score was higher in ActiveCase than EHC samples (Mann-Whitney P = 0.000637). Across 22 deconvolved cell types, only M1 macrophages showed an FDR-supported positive correlation with this score (rho = 0.787, BH q = 0.000503). After all 132 score genes were excluded before network construction, a 124-gene magenta module remained associated with the score (rho = 0.837, BH q = 4.29 × 10^-5). A refitted IFNG/GBP5/MX2 classifier achieved a same-study validation AUC of 0.917 (bootstrap 95% CI 0.733-1.000), but the validation set contained only 16 samples. Conclusion: These public datasets support an IFN-gamma-associated inflammatory state in active VL and exploratory cross-compartment convergence with pediatric HLH. The 132-gene score, deconvolution, network, and classifier results are hypothesis-generating and do not establish HLH specificity, cellular causality, independent external validity, or clinical HLH prediction.

Indexed as

InflammationInterferon-gammaLeishmaniasis, VisceralLymphohistiocytosis, HemophagocyticTranscriptomeAnimalsChemokine CXCL10Chemokine CXCL9ChildChild, PreschoolFemaleGene Expression ProfilingHumansLeishmania donovaniMacrophagesMiceChemokine CXCL10Chemokine CXCL9Cxcl10 protein, mouseCXCL9 protein, humanCxcl9 protein, mouseInterferon-gammaCXCL10CXCL9hemophagocytic lymphohistiocytosisIFN-gammasingle-cell transcriptomeSTAT1visceral leishmaniasis

Identifiers

PMID42889065
PMCPMC13668529

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.