Evidence map›Paper›PMID 42879477›Full record

ArticleProceedings of the National Academy of Sciences of the United States of America2026

Global proteolysis during starvation governs proteome remodeling and a survival-regrowth trade-off in bacteria.

Gabriel Manzanarez, Rohan Balakrishnan, Harish Kannan, Miriam Abele, Hiroyuki Okano, Fukang She, Zhongge Zhang, Chenhao Wu, Lance Freiman, Christina Ludwig and 2 more

Abstract read
In one paragraph

Article in Proceedings of the National Academy of Sciences of the United States of America, 2026. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors.

Gabriel Manzanarez *Division of Biological Sciences, University of California at San Diego, La Jolla, CA 92093.
Rohan Balakrishnan *Department of Physics, University of California at San Diego, La Jolla, CA 92093.
Harish Kannan *Department of Mathematics, University of California at San Diego, La Jolla, CA 92093.ORCID 0009-0001-3908-0584
Miriam AbeleBavarian Center for Biomolecular Mass Spectrometry, School of Life Sciences, Technical University of Munich, Freising, Germany.
Hiroyuki OkanoDepartment of Physics, University of California at San Diego, La Jolla, CA 92093.
Fukang SheDepartment of Physics, University of California at San Diego, La Jolla, CA 92093.
Zhongge ZhangDivision of Biological Sciences, University of California at San Diego, La Jolla, CA 92093.
Chenhao WuDepartment of Physics, University of California at San Diego, La Jolla, CA 92093.
Lance FreimanDivision of Biological Sciences, University of California at San Diego, La Jolla, CA 92093.
Christina LudwigBavarian Center for Biomolecular Mass Spectrometry, School of Life Sciences, Technical University of Munich, Freising, Germany.ORCID 0000-0002-6131-7322
Matteo MoriDepartment of Physics, University of California at San Diego, La Jolla, CA 92093.ORCID 0000-0002-6263-8021
Terence HwaDivision of Biological Sciences, University of California at San Diego, La Jolla, CA 92093.ORCID 0000-0003-1837-6842

Funding

Quantitative Systemic Studies of Bacterial PhysiologyR35GM152133 · NIGMS · UNIVERSITY OF CALIFORNIA, SAN DIEGO · PI TERENCE HWA · 2024 to 2026
$1.8M
Bayerisch-Kalifornischen Hochschulzentrum (BaCaTeC) 2023-1DOW | National Defense Science and Engineering Graduate (NDSEG) graduate fellowshipEuropean Proteomics Infrastructure Consortium providing access (EPIC-XS) 823839German Research Foundation INST 95/1435-1 FUGGHHS | NIH | National Institute of General Medical Sciences (NIGMS) R35GM152133National Science Foundation (NSF) 2545232Simons Foundation (SF) 542387
6 · The paper itself

Abstract

Starving bacteria must synthesize stress proteins to survive, but how protein synthesis persists in the absence of nutrient influx is unclear. We show that in

Indexed as

Escherichia coliEscherichia coli ProteinsProteolysisProteomeAmino AcidsBacterial ProteinsCarbonGene Expression Regulation, BacterialSigma FactorAmino AcidsBacterial ProteinsCarbonEscherichia coli ProteinsProteomeSigma Factorsigma factor KatF protein, Bacteriaproteolysisproteome remodelingresource allocationstarvation responsestationary phase

Identifiers

PMID42879477
PMCPMC13684143

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.