Evidence map›Paper›PMID 42878903›Full record

ArticleMarine biotechnology (New York, N.Y.)2026

Phenotype-Anchored Multi-Omics Reveals Mechanisms Underlying Starvation-Induced Body, Liver, and Gallbladder Discoloration in Rock Carp (Procypris rabaudi).

Hongsen Lyu, Caifang Hao, Hongkuan Cao, Jingning Ling, Yixiao Li, Wei Zou, Zehao Li, Longfen Han, Qi Liu, Dong Han and 2 more

Abstract read
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Article in Marine biotechnology (New York, N.Y.), 2026. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

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1 · What the graph read from it

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Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

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3 · Its place in the literature

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4 · The record

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5 · Who and what money

Authors and funding

12 authors.

Hongsen LyuCollege of Fisheries, Southwest University, Chongqing, 400715, China.
Caifang HaoCollege of Fisheries, Southwest University, Chongqing, 400715, China.
Hongkuan CaoCollege of Fisheries, Southwest University, Chongqing, 400715, China.
Jingning LingCollege of Fisheries, Southwest University, Chongqing, 400715, China.
Yixiao LiCollege of Fisheries, Southwest University, Chongqing, 400715, China.
Wei ZouCollege of Fisheries, Southwest University, Chongqing, 400715, China.
Zehao LiCollege of Fisheries, Southwest University, Chongqing, 400715, China.
Longfen HanCollege of Fisheries, Southwest University, Chongqing, 400715, China.
Qi LiuCollege of Fisheries, Southwest University, Chongqing, 400715, China.
Dong HanInstitute of Hydrobiology, Chinese Academy of Sciences, Wuhan, 430072, China. hand21cn@ihb.ac.cn.
Weizhi YaoCollege of Fisheries, Southwest University, Chongqing, 400715, China. yaowz@swu.edu.cn.
Wenping HeCollege of Fisheries, Southwest University, Chongqing, 400715, China. hewenping2008@163.com.

Funding

Fundamental Research Funds for the Central Universities SWU-XDJH202317National Key Research and Development Program of China 2022YFC3204201National Key Research and Development Program of China 2022YFD1201600National Natural Science Foundation of China 32071651Technical Innovation and Application Development Project of Chongqing CSTB2023TIAD-LDX0001The Earmarked fund for CARS CARS-49
6 · The paper itself

Abstract

Visible changes in body and internal organ coloration can serve as practical indicators of nutritional and metabolic stress in aquaculture, but their physiological meaning remains poorly understood. Here, we used starvation as a controlled nutritional stress model to investigate the physiological and molecular changes associated with body color fading and liver and gallbladder discoloration in rock carp (Procypris rabaudi). To assess the effects of food deprivation (0-35 days), fish were examined using growth and biochemical assays, intestinal histology, as well as integrated hepatic transcriptomic and metabolomic profiling. Starvation caused weight loss, reduced condition factor and hepatosomatic index, intestinal atrophy, dynamic changes in digestive enzyme activities, and a transition from early antioxidant activation to late-stage oxidative injury. It also produced a clear sequence of visible color changes, with body pigmentation fading from deep black to reddish-brown, the liver changing from dark red to pink, and the gallbladder changing from dark green or black to pale yellow or yellow-green. Multi-omics analysis associated these phenotypes with three major processes. Body color fading was associated with down-regulation of bcl-2l10, bcl-2l11, and cdk2 and depletion of tyrosine-related metabolites, suggesting possible alterations in melanogenesis-related substrate availability. Liver paling was linked to lipid and glycogen mobilization, as indicated by altered fabp and aldo expression and decreased levels of glycerophosphocholine, phosphatidylethanolamine, and phosphatidylcholine. Gallbladder discoloration was consistent with reduced expression of ho-1 and abcb11, suggesting possible involvement of pathways related to bile pigment formation and bile salt transport. Lysophosphatidic acid and demethylnobiletin were identified as candidate indicators of late-stage oxidative injury. These findings indicate that starvation-induced color changes are informative physiological phenotypes rather than superficial traits, and may support future monitoring of nutritional stress and organ dysfunction in rock carp aquaculture.

Indexed as

CarpsGallbladderLiverPigmentationStarvationAnimalsMelanogenesisMultiomicsPhenotypeTranscriptomeGene expression regulationHepatobiliary metabolismMetabolic remodelingNutritional stressPigment regulation

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.