Evidence map›Paper›PMID 42877050›Full record

ArticleFrontiers in microbiomes2026

Urban land use influences microbial functional traits along a management intensity gradient.

Fadwa Khalfallah, Nicolas Legay, Sebastien Bonthoux, Amélie A M Cantarel, Jean-Christophe Clement, Arnaud Foulquier, Catherine Joulian, Xavier Le Roux, Agnès Richaume, Marie-Paule Norini and 1 more

Abstract read
In one paragraph

Article in Frontiers in microbiomes, 2026. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors.

Fadwa KhalfallahBRGM - French Geological Survey, Orléans, France.
Nicolas LegayInstitut National des Sciences Appliquées Centre Val de Loire, Université de Tours, UMR 7324 Cités, Territoires, Environnement et Sociétés, Blois, France.
Sebastien BonthouxInstitut National des Sciences Appliquées Centre Val de Loire, Université de Tours, UMR 7324 Cités, Territoires, Environnement et Sociétés, Blois, France.
Amélie A M CantarelUniversité Lyon 1, CNRS, INRAE, Laboratoire d'Ecologie Microbienne (LEM), UMR 5557, UMR 1418 Villeurbanne, France.
Jean-Christophe ClementUniv. Savoie Mont Blanc, INRAE, Centre Alpin de Recherche sur les Réseaux Trophiques et les Écosystèmes Limniques, Thonon-Les-Bains, France.
Arnaud FoulquierUniv. Grenoble Alpes, Univ. Savoie Mont Blanc, Centre National de la Recherche Scientifique, Laboratoire d'Ecologie Alpine, Grenoble, France.
Catherine JoulianBRGM - French Geological Survey, Orléans, France.
Xavier Le RouxUniversité Lyon 1, CNRS, INRAE, Laboratoire d'Ecologie Microbienne (LEM), UMR 5557, UMR 1418 Villeurbanne, France.
Agnès RichaumeUniversité Lyon 1, CNRS, INRAE, Laboratoire d'Ecologie Microbienne (LEM), UMR 5557, UMR 1418 Villeurbanne, France.
Marie-Paule NoriniBRGM - French Geological Survey, Orléans, France.
Jennifer HarrisBRGM - French Geological Survey, Orléans, France.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Introduction: Urbanization alters soil conditions and may strongly affect microbial communities, yet the functional consequences of these changes remain poorly understood. We investigated how urban land use and management intensity shape microbial diversity, functional traits, and interaction patterns in urban soils. Methods: We sampled 135 soils across eight land-use types in Blois (France), each assigned a management intensity level from 1 (low) to 4 (high). Bacterial and fungal communities were characterized using Illumina sequencing, fungal guilds were identified using FungalTraits, bacterial taxa were classified by life strategies, enzymatic activities were measured, and co-occurrence networks were constructed. Results: Land-use type and management intensity strongly influenced microbial composition, diversity, and functioning. Highly managed sites (Gardens, Sports fields) showed lower fungal 18S rRNA gene abundance, higher bacterial 16S rRNA gene copy numbers, reduced diversity, and lower nitrogen-related enzyme activities compared to less managed sites (Unused areas). These sites also exhibited more oligotroph-dominated and interconnected communities. Co-occurrence networks were less connected than those reported in semi-natural ecosystems, indicating more fragmented microbial associations in urban soils. Discussion: Our findings reveal that management intensity acts as a strong ecological filter shaping microbial functional traits and interaction patterns in urban soils. The reduced connectivity and functional shifts observed in intensively managed sites highlight the need to integrate microbial indicators into urban green-space planning and management.

Indexed as

biodiversityland usemanagement intensitymicrobial communitiesurban green spacesurban soil

Identifiers

PMID42877050
PMCPMC13662681

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.