Evidence map›Paper›PMID 42875173›Full record

ArticleLife science alliance2026

SARS-CoV-2 nucleocapsid protein hijacks host transcription by targeting eEF1A1.

Baptiste Bidon, Yu-Lin Lai, Tai-Ling Chao, Gawa Chen, Yee-Shin Lee, Hsiang-Hung Huang, Jia-Syuan Chen, Alejandro Gonzalez Losada, Sui-Yuan Chang, Jean-Marc Egly and 1 more

Abstract read
In one paragraph

Article in Life science alliance, 2026. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

11 authors.

Baptiste BidonTaiwan International Bio Research Center (TIBRC), College of Medicine, National Taiwan University, Taipei, Taiwan.ORCID https://orcid.org/0000-0003-0113-8717
Yu-Lin LaiTaiwan International Bio Research Center (TIBRC), College of Medicine, National Taiwan University, Taipei, Taiwan.
Tai-Ling ChaoDepartment of Clinical Laboratory Sciences and Medical Biotechnology, College of Medicine, National Taiwan University, Taipei, Taiwan.
Gawa ChenTaiwan International Bio Research Center (TIBRC), College of Medicine, National Taiwan University, Taipei, Taiwan.ORCID https://orcid.org/0000-0002-5871-8117
Yee-Shin LeeTaiwan International Bio Research Center (TIBRC), College of Medicine, National Taiwan University, Taipei, Taiwan.
Hsiang-Hung HuangTaiwan International Bio Research Center (TIBRC), College of Medicine, National Taiwan University, Taipei, Taiwan.
Jia-Syuan ChenDepartment of Life Science, Institute of Ecology and Evolutionary Biology, National Taiwan University, Taipei, Taiwan.ORCID https://orcid.org/0000-0002-6587-9197
Alejandro Gonzalez LosadaCell Biology and Pharmacogenomics Department, PharmaMar S.A, Colmenar Viejo, Spain.ORCID https://orcid.org/0009-0001-2405-878X
Sui-Yuan ChangDepartment of Clinical Laboratory Sciences and Medical Biotechnology, College of Medicine, National Taiwan University, Taipei, Taiwan.
Jean-Marc EglyTaiwan International Bio Research Center (TIBRC), College of Medicine, National Taiwan University, Taipei, Taiwan egly@igbmc.fr.ORCID https://orcid.org/0000-0002-5960-6571
Tsai-Kun LiTaiwan International Bio Research Center (TIBRC), College of Medicine, National Taiwan University, Taipei, Taiwan.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

SARS-CoV-2 variants display substantial genetic and phenotypic diversity, yet the molecular mechanisms underlying their effects on host gene regulation need further investigation. We performed a transcriptomic analysis of host responses to multiple SARS-CoV-2 variants, including Delta and Omicron. Despite their divergence, all variants induced a conserved transcriptional program in human lung epithelial cells characterized by activation of interferon regulatory factors (IRFs), immediate-early genes, and downstream cytokines. We identify the viral nucleocapsid (N) protein as a central driver of this transcriptional reprogramming, as N expression alone partially recapitulated the host response to infection. Mechanistically, N promotes recruitment of interferon regulatory factors and AP-1 transcription factors, RNA polymerase II, and the elongation factor eEF1A1 to promoters of pro-inflammatory genes, revealing a previously unrecognized nuclear role for eEF1A1. Disruption of the N-eEF1A1 interaction, genetically or pharmacologically using the eEF1A interactant plitidepsin, abolished transcriptional complex formation and reversed host gene dysregulation, identifying a conserved host-virus regulatory axis and potential pan-variant therapeutic target.

Indexed as

Coronavirus Nucleocapsid ProteinsHost-Pathogen InteractionsPeptide Elongation Factor 1PhosphoproteinsSARS-CoV-2Epithelial CellsGene Expression RegulationHumansRNA Polymerase IITranscription Factor AP-1Transcription, GeneticCoronavirus Nucleocapsid ProteinsEEF1A1 protein, humanPeptide Elongation Factor 1PhosphoproteinsRNA Polymerase IITranscription Factor AP-1

Identifiers

PMID42875173
PMCPMC13669674

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.