Evidence map›Paper›PMID 42873275›Full record

ArticleTAG. Theoretical and applied genetics. Theoretische und angewandte Genetik2026

Genome-wide association mapping of tan spot resistance in a modified NAM population derived from synthetic hexaploid wheat.

Anil Karmacharya, Dhondup Lhamo, Md Mukul Islam, Han-Chang Chang, Jason D Fiedler, Timothy L Friesen, Justin D Faris, Shengming Yang, Xiaofei Zhang, Yong Q Gu and 2 more

Abstract read
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Article in TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik, 2026. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors.

Anil KarmacharyaDepartment of Plant Sciences, University of California, Davis, CA, 95616, USA.ORCID http://orcid.org/0000-0003-0363-8483
Dhondup LhamoUSDA-ARS, Crop Improvement and Genetics Research Unit, Western Regional Research Center, Albany, CA, 94710, USA.ORCID http://orcid.org/0009-0009-9674-6344
Md Mukul IslamDepartment of Plant Pathology, Microbiology and Biotechnology, North Dakota State University, Fargo, ND, 58108, USA.ORCID http://orcid.org/0000-0002-5746-0265
Han-Chang ChangUSDA-ARS, Crop Improvement and Genetics Research Unit, Western Regional Research Center, Albany, CA, 94710, USA.
Jason D FiedlerUSDA-ARS, Cereal Crops Improvement Research Unit, Edward T. Schafer Agriculture Research Center, Fargo, ND, 58102, USA.ORCID http://orcid.org/0000-0001-7736-4484
Timothy L FriesenDepartment of Plant Pathology, Microbiology and Biotechnology, North Dakota State University, Fargo, ND, 58108, USA.ORCID http://orcid.org/0000-0001-5634-2200
Justin D FarisUSDA-ARS, Cereal Crops Improvement Research Unit, Edward T. Schafer Agriculture Research Center, Fargo, ND, 58102, USA.ORCID http://orcid.org/0000-0002-9653-3287
Shengming YangUSDA-ARS, Cereal Crops Improvement Research Unit, Edward T. Schafer Agriculture Research Center, Fargo, ND, 58102, USA.ORCID http://orcid.org/0000-0002-4558-8448
Xiaofei ZhangDepartment of Plant Sciences, University of California, Davis, CA, 95616, USA.ORCID http://orcid.org/0000-0003-4516-9179
Yong Q GuUSDA-ARS, Crop Improvement and Genetics Research Unit, Western Regional Research Center, Albany, CA, 94710, USA.ORCID http://orcid.org/0000-0002-2575-4744
Zhaohui LiuDepartment of Plant Pathology, Microbiology and Biotechnology, North Dakota State University, Fargo, ND, 58108, USA. zhh.liu@ndsu.edu.ORCID http://orcid.org/0000-0002-8106-9186
Steven S XuUSDA-ARS, Crop Improvement and Genetics Research Unit, Western Regional Research Center, Albany, CA, 94710, USA. steven.xu@usda.gov.ORCID http://orcid.org/0000-0001-7000-2034

Funding

Agricultural Marketing Service 2030-21430-015-00DNational Institute of Food and Agriculture ND02234
6 · The paper itself

Abstract

key messageA total of 37 SNPs associated with resistance to five races of Pyrenophora tritici-repentis and two necrotrophic effectors were identified in a NAM population derived from synthetic and spring wheat. Tan spot, caused by Pyrenophora tritici-repentis, is a major foliar disease of wheat worldwide, and expanding the genetic basis of resistance remains a breeding priority. Synthetic hexaploid wheat (SHW) represents a valuable reservoir of novel alleles, yet its contribution to tan spot resistance has not been fully characterized. Here, a modified Nested Association Mapping population including 276 BC

Indexed as

AscomycotaDisease ResistancePlant DiseasesTriticumAllelesChromosome MappingGenetic Association StudiesGenetic MarkersGenome-Wide Association StudyGenotypePhenotypePolymorphism, Single NucleotidePolyploidyQuantitative Trait LociGenetic Markers

Identifiers

PMID42873275

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.