Evidence map›Paper›PMID 42872096›Full record

ArticleNature reviews bioengineering2026

Multi-objective antibody design and optimization using machine learning.

Yun-Huai Kuo, Chloe N Brown, Ece Akin, Yunxuan Xie, Peter M Tessier

Abstract read
In one paragraph

Article in Nature reviews bioengineering, 2026. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

5 authors.

Yun-Huai KuoDepartment of Chemical Engineering, University of Michigan, Ann Arbor, MI 48109, USA.
Chloe N BrownDepartment of Chemical Engineering, University of Michigan, Ann Arbor, MI 48109, USA.
Ece AkinDepartment of Chemical Engineering, University of Michigan, Ann Arbor, MI 48109, USA.
Yunxuan XieDepartment of Pharmaceutical Sciences, University of Michigan, Ann Arbor, MI 48109, USA.
Peter M TessierDepartment of Chemical Engineering, University of Michigan, Ann Arbor, MI 48109, USA.

Funding

CD98hc Brain Shuttles for Delivering Off-the-shelf Neuroprotective Antibodies in Alzheimer's DiseaseR01AG080016 · NIA · UNIVERSITY OF MICHIGAN AT ANN ARBOR · PI Colin Fred Greineder, Peter M Tessier · 2023 to 2026
$3.2M
Neuron-specific modulation of gene expression using systemically administered bispecific antibody-ASO conjugatesR01NS138455 · NINDS · UNIVERSITY OF MICHIGAN AT ANN ARBOR · PI Peter M Tessier, Greg Thurber · 2024 to 2026
$1.8M
Structure-guided antibody targeting of pre-selected epitopes in amyloidogenic aggregatesR35GM136300 · NIGMS · UNIVERSITY OF MICHIGAN AT ANN ARBOR · PI TESSIER, PETER M · 2020 to 2024
$1.5M
Non-invasive and Long-lived CNS Delivery of Treg-inducing Cytokine DepotsR01EB036493 · NIBIB · UNIVERSITY OF MICHIGAN AT ANN ARBOR · PI James J. Moon, Peter M Tessier · 2025 to 2026
$1.2M
Long-lived Activation of Parenchymal Border Macrophages Using Immunocytokines to Address Aging- and Alzheimer’s Disease-associated Deficits in Cerebrospinal Fluid DynamicsR21AG093031 · NIA · UNIVERSITY OF MICHIGAN AT ANN ARBOR · PI Peter M Tessier · 2025 to 2026
$443k
Efficient and Long-lived Brain Delivery of Neutralizing Antibodies Against Eastern Equine Encephalitis Virus for Post-exposure TherapyR21AI190578 · NIAID · UNIVERSITY OF MICHIGAN AT ANN ARBOR · PI Peter M Tessier · 2025 to 2026
$435k
Neuronal Silencing of ATXN3 Using Peripherally Administered Antibody/ASO Conjugates That Penetrate the Blood-Brain BarrierR21NS132018 · NINDS · UNIVERSITY OF MICHIGAN AT ANN ARBOR · PI TESSIER, PETER M · 2023 to 2024
$429k
Mutational Analysis of Tradeoffs between Receptor Affinity and Antibody Escape for SARS-CoV-2 Variants of ConcernR21AI171844 · NIAID · UNIVERSITY OF MICHIGAN AT ANN ARBOR · PI TESSIER, PETER M · 2022 to 2023
$405k
NIAID NIH HHS R21 AI171844NIAID NIH HHS R21 AI190578NIA NIH HHS R01 AG080016NIA NIH HHS R21 AG093031NIBIB NIH HHS R01 EB036493NIGMS NIH HHS R35 GM136300NINDS NIH HHS R01 NS138455NINDS NIH HHS R21 NS132018
6 · The paper itself

Abstract

Antibodies, ranging from conventional immunoglobulins to single-domain and bispecific antibodies, are developed for a wide spectrum of therapeutic and diagnostic applications. However, lead antibodies are commonly engineered to optimize one or more key properties, including affinity, specificity, polyreactivity, stability, aggregation, and immunogenicity, and tradeoffs among these attributes frequently hinder the development of variants suitable for clinical use. Furthermore, identifying lead candidates with desirable properties typically requires multiple rounds of experimental screening and evaluation, particularly when targeting pre-selected epitopes or challenging, high-value targets such as G protein-coupled receptors (GPCRs), ion channels, and multipass membrane proteins. Artificial intelligence (AI) and machine learning (ML) methods can streamline experimental screening and antibody generation methods. In this Review, we discuss both computational multi-objective optimization of existing antibodies and de novo antibody design. The application of AI/ML methods has the potential to overcome current bottlenecks in antibody development and accelerate the generation of improved therapeutics for human health.

Identifiers

PMID42872096
PMCPMC13660761

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.