Evidence map›Paper›PMID 42871609›Full record

ArticleChemical science2026

Beyond the catalytic serine: selective protease engagement with covalent macrocyclic activity-based probes.

Marina Barrueco, Ellie Hyde, Ella Sawtell, Jack V Mills, Vaia Nikoloudi, Marianne Enget, Maisem Laabei, Markus Lakemeyer, Scott Lovell

Abstract read
In one paragraph

Article in Chemical science, 2026. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors.

Marina BarruecoDepartment of Life Sciences, University of Bath Bath UK sdl35@bath.ac.uk.
Ellie HydeDepartment of Life Sciences, University of Bath Bath UK sdl35@bath.ac.uk.
Ella SawtellDepartment of Life Sciences, University of Bath Bath UK sdl35@bath.ac.uk.
Jack V MillsDepartment of Life Sciences, University of Bath Bath UK sdl35@bath.ac.uk.ORCID https://orcid.org/0000-0002-1852-4596
Vaia NikoloudiDepartment of Life Sciences, University of Bath Bath UK sdl35@bath.ac.uk.
Marianne EngetDepartment of Life Sciences, University of Bath Bath UK sdl35@bath.ac.uk.ORCID https://orcid.org/0009-0000-2366-3243
Maisem LaabeiSchool of Biochemistry and Biomedical Sciences, University of Bristol Bristol UK.
Markus LakemeyerCluster of Excellence Balance of the Microverse, Institute for Organic Chemistry and Macromolecular Chemistry (IOMC), Friedrich Schiller University Jena 07743 Germany.
Scott LovellDepartment of Life Sciences, University of Bath Bath UK sdl35@bath.ac.uk.ORCID https://orcid.org/0000-0002-9627-5679

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Activity-based probes (ABPs) are widely used to profile serine protease activity - enzymes central to diverse physiological and pathological processes - but most rely on covalent modification of the conserved catalytic serine residue, often resulting in poor selectivity across related proteases. Here, we introduce covalent macrocyclic activity-based probes (cmABPs) that selectively target non-catalytic residues within serine protease active sites. By combining phage display with systematic electrophile scanning, we identify macrocyclic scaffolds that position sulfur(vi) fluoride (SuFEx) electrophiles to covalently engage alternative nucleophiles such as lysine and tyrosine. Applied to plasma kallikrein, this approach yielded a macrocyclic scaffold that was converted into covalent probes

Identifiers

PMID42871609
PMCPMC13659818

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.