Evidence map›Paper›PMID 42869459›Full record

ArticleJournal of the Royal Society, Interface2026

Recurrent neural chemical reaction networks trained to switch dynamical behaviours through learned bifurcations.

Alexander Dack, Tomislav Plesa, Thomas E Ouldridge

Abstract read
In one paragraph

Article in Journal of the Royal Society, Interface, 2026. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors.

Alexander DackDepartment of Bioengineering and Imperial College Centre for Engineering Biology, Imperial College London , London, UK.ORCID 0000-0001-8649-5822
Tomislav PlesaDepartment of Applied Mathematics and Theoretical Physics, University of Cambridge , Cambridge, UK.
Thomas E OuldridgeDepartment of Bioengineering and Imperial College Centre for Engineering Biology, Imperial College London , London, UK.

Funding

Department of Bioengineering at Imperial College LondonEPSRC EP/Y014073/1Peterhouse, University of CambridgeRoyal Society URF\R\211020
6 · The paper itself

Abstract

Both natural and synthetic chemical systems not only exhibit a range of non-trivial dynamics, but also transition between qualitatively different dynamical behaviours as environmental parameters change. Such transitions are called bifurcations. Here, we show that recurrent neural chemical reaction networks (RNCRNs), a class of chemical reaction networks based on recurrent artificial neural networks that can be trained to reproduce a given dynamical behaviour, can also be trained to exhibit bifurcations. First, we show that RNCRNs can inherit some bifurcations defined by smooth ordinary differential equations (ODEs). Second, we demonstrate that the RNCRN can be trained to infer bifurcations that allow it to approximate different target behaviours within different regions of parameter space, without explicitly providing the bifurcation itself in the training. These behaviours can be specified using target ODEs that are discontinuous with respect to the parameters, or even simply by specifying certain desired dynamical features in certain regions of the parameter space. To achieve the latter, we introduce an ODE-free algorithm for training the RNCRN to display designer oscillations, such as a heart-shaped limit cycle or two coexisting limit cycles.

Indexed as

AlgorithmsModels, ChemicalNeural Networks, ComputerRecurrent Neural Networksartificial neural networkschemical reaction networksdynamical systems

Identifiers

PMID42869459
PMCPMC13682565

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.