Evidence map›Paper›PMID 42857653›Full record

ArticlePhysics and imaging in radiation oncology2026

Deep learning segmentation of the cerebral ventricular system and brainstem for pediatric radiotherapy planning.

Feline Heinzelmann, Fabian Hörst, Lukas Heine, Jana Fragemann, Moritz Rempe, Gijs Luijten, Sarah Peters, Julian Hlouschek, Jan Egger, Beate Timmermann and 2 more

Abstract read
In one paragraph

Article in Physics and imaging in radiation oncology, 2026. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

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1 · What the graph read from it

What it found

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The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

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Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

12 authors.

Feline HeinzelmannWest German Proton Therapy Centre Essen (WPE), Essen, Germany.
Fabian HörstInstitute for Artificial Intelligence in Medicine (IKIM), University Hospital Essen, Essen, Germany.
Lukas HeineInstitute for Artificial Intelligence in Medicine (IKIM), University Hospital Essen, Essen, Germany.
Jana FragemannInstitute for Artificial Intelligence in Medicine (IKIM), University Hospital Essen, Essen, Germany.
Moritz RempeTU Dortmund University, Department of Physics, Dortmund, Germany.
Gijs LuijtenInstitute for Artificial Intelligence in Medicine (IKIM), University Hospital Essen, Essen, Germany.
Sarah PetersWest German Proton Therapy Centre Essen (WPE), Essen, Germany.
Julian HlouschekWest German Proton Therapy Centre Essen (WPE), Essen, Germany.
Jan EggerInstitute for Artificial Intelligence in Medicine (IKIM), University Hospital Essen, Essen, Germany.
Beate TimmermannWest German Proton Therapy Centre Essen (WPE), Essen, Germany.
Jens KleesiekTU Dortmund University, Department of Physics, Dortmund, Germany.
Christian BäumerWest German Proton Therapy Centre Essen (WPE), Essen, Germany.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Background and Purpose: Segmentation of the cerebral ventricular system (VS) is central to radiotherapy, both for whole-ventricular irradiation in intracranial germ cell tumors (GCTs) and protection of the periventricular region. Complex, variable VS anatomy makes manual delineation challenging and hampers auto-segmentation model development. We reported the evaluation and workflow integration of a deep-learning (DL) model for VS and brainstem segmentation on pediatric magnetic resonance imaging (MRI). Materials and methods: An nnU-Net was trained on MRIs from 76 unique brain tumor cases ( Results: In the GCT-CT cohort, brainstem segmentations achieved median DSCs of >0.85 and HDs Conclusions: Lower performance in the GCT-CT cohort likely reflects noisier CT-based references, interobserver variability, and uncorrected geometric/anatomical mismatch. The model's accuracy supports radiotherapy planning in pediatric brain tumors through risk-structure delineation and target-volume segmentation in GCTs.

Indexed as

BrainstemDeep learning segmentationnnunet modelPediatric brain tumorRadiotherapy planningVentricular system

Identifiers

PMID42857653
PMCPMC13651686

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.