Evidence map›Paper›PMID 42857253›Full record

ArticleNAR genomics and bioinformatics2026

Controlling for DNA dosage with whole-genome sequencing improves ATAC-seq peak calling.

Christophe Vroland, Mohammad Salma, Artemy Zhigulev, Pelin Sahlen, Eric Soler, Laurent Bréhélin, Charles-Henri Lecellier

Abstract read
In one paragraph

Article in NAR genomics and bioinformatics, 2026. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors.

Christophe VrolandIGMM, Univ Montpellier, CNRS, Montpellier, France.ORCID https://orcid.org/0009-0002-9935-2606
Mohammad SalmaInitiatives IdEx Globule Rouge d'Excellence (InIdex GR-Ex), Université Paris Cité, Paris, France.ORCID https://orcid.org/0000-0002-3648-1809
Artemy ZhigulevKTH Royal Institute of Technology, SciLifeLab, Stockholm, Sweden.ORCID https://orcid.org/0000-0001-9251-1059
Pelin SahlenKTH Royal Institute of Technology, SciLifeLab, Stockholm, Sweden.ORCID https://orcid.org/0000-0001-6943-9618
Eric SolerIGMM, Univ Montpellier, CNRS, Montpellier, France.ORCID https://orcid.org/0000-0003-0521-7463
Laurent BréhélinLIRMM, Univ Montpellier, CNRS, Montpellier, France.ORCID https://orcid.org/0000-0002-2582-2831
Charles-Henri LecellierIGMM, Univ Montpellier, CNRS, Montpellier, France.ORCID https://orcid.org/0000-0002-0229-5434

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

ATAC-seq is a powerful method for mapping chromatin accessibility and identifying

Indexed as

Chromatin Immunoprecipitation SequencingGene DosageSequence Analysis, DNAWhole Genome SequencingDNADNA Copy Number VariationsHumansDNA

Identifiers

PMID42857253
PMCPMC13650242

What OpenQuestion holds

Textmetadata
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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.