Evidence map›Paper›PMID 42853912›Full record

ArticleScience advances2026

Chromatin interaction landscape of epimorphic regeneration in teleost fish.

Xiaohui Jia, Xianglei Zhang, Weifeng Lin, Tengfei Ren, Shiqi Liu, Yufei Lou, Wei Wang

Abstract read
In one paragraph

Article in Science advances, 2026. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors.

Xiaohui JiaCollege of Biological Sciences, China Agricultural University, Beijing 100083, China.ORCID 0009-0002-7518-4054
Xianglei ZhangNational Institute of Biological Sciences, Beijing 102206, China.ORCID 0009-0006-7879-3073
Weifeng LinNational Institute of Biological Sciences, Beijing 102206, China.ORCID 0009-0001-3470-1687
Tengfei RenNational Institute of Biological Sciences, Beijing 102206, China.
Shiqi LiuNational Institute of Biological Sciences, Beijing 102206, China.
Yufei LouNational Institute of Biological Sciences, Beijing 102206, China.
Wei WangNational Institute of Biological Sciences, Beijing 102206, China.ORCID 0000-0001-9511-3611

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Reorganization of chromatin architecture-including chromatin loops, topologically associating domains (TADs), and A/B compartments-has been increasingly linked to development and cell differentiation. However, how chromatin architecture reorganizes during the shift from homeostasis to regeneration remains poorly characterized. Here, we used zebrafish fin regeneration as a model to systematically investigate, via micro-C, the chromatin architecture associated with blastema formation. Our analyses unveiled that the alteration of chromatin looping upon amputation was dominant compared with that of TADs and compartments. Genes directly linked to injury-altered loop interactions, including essential regeneration regulators, were mainly related to morphogenesis and cell division. A side-by-side comparison between zebrafish and African killifish uncovered conserved and species-specific chromatin reorganization following injury. Notably, perturbing injury-altered loop interactions at the

Indexed as

ChromatinRegenerationZebrafishAnimal FinsAnimalsChromatin Assembly and DisassemblyZebrafish ProteinsChromatinZebrafish Proteins

Identifiers

PMID42853912
PMCPMC13651840

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.