Evidence map›Paper›PMID 42844268›Full record

ArticleNature communications2026

Ghd7‑triggered transcriptional regulation for synergistically improving rice eating quality and yield.

Guangming Lou, Haozhou Gao, Gonghao Jiang, Yahong Tian, Minqi Li, Wenting Rao, Zixuan Zhao, Ruoqian Yu, Yuanyuan Zheng, Huan Shi and 15 more

Abstract read
In one paragraph

Article in Nature communications, 2026. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed.

  1. Review
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

25 authors.

Guangming Lou *National Key Laboratory of Crop Genetic Improvement, Huazhong Agricultural University, Wuhan, China.
Haozhou Gao *National Key Laboratory of Crop Genetic Improvement, Huazhong Agricultural University, Wuhan, China.
Gonghao Jiang *College of Life Science, Heilongjiang University, Ha'erbin, China.
Yahong TianNational Key Laboratory of Crop Genetic Improvement, Huazhong Agricultural University, Wuhan, China.
Minqi LiNational Key Laboratory of Crop Genetic Improvement, Huazhong Agricultural University, Wuhan, China.
Wenting RaoNational Key Laboratory of Crop Genetic Improvement, Huazhong Agricultural University, Wuhan, China.
Zixuan ZhaoNational Key Laboratory of Crop Genetic Improvement, Huazhong Agricultural University, Wuhan, China.
Ruoqian YuNational Key Laboratory of Crop Genetic Improvement, Huazhong Agricultural University, Wuhan, China.
Yuanyuan ZhengNational Key Laboratory of Crop Genetic Improvement, Huazhong Agricultural University, Wuhan, China.
Huan ShiNational Key Laboratory of Crop Genetic Improvement, Huazhong Agricultural University, Wuhan, China.
Shiyuan ChengNational Key Laboratory of Crop Genetic Improvement, Huazhong Agricultural University, Wuhan, China.
Yuli CaoNational Key Laboratory of Crop Genetic Improvement, Huazhong Agricultural University, Wuhan, China.
Pingli ChenNational Key Laboratory of Crop Genetic Improvement, Huazhong Agricultural University, Wuhan, China.
Yanhua LiNational Key Laboratory of Crop Genetic Improvement, Huazhong Agricultural University, Wuhan, China.
Guanjun GaoNational Key Laboratory of Crop Genetic Improvement, Huazhong Agricultural University, Wuhan, China.
Bian WuNational Key Laboratory of Crop Genetic Improvement, Huazhong Agricultural University, Wuhan, China.
Junxiao ChenNational Key Laboratory of Crop Genetic Improvement, Huazhong Agricultural University, Wuhan, China.
Yuexing WangState Key Laboratory of Rice Biology and Breeding, China National Rice Research Institute, Hangzhou, China.ORCID 0000-0002-0646-5664
Yibo LiNational Key Laboratory of Crop Genetic Improvement, Huazhong Agricultural University, Wuhan, China.ORCID 0000-0001-6105-1969
Xuelei LaiNational Key Laboratory of Crop Genetic Improvement, Huazhong Agricultural University, Wuhan, China.ORCID 0000-0003-4989-2444
Ping YanInstitute of Biotechnology, Helongjiang Academy of Agricultural Science, Wuchang, China.
Daoxiu ZhouNational Key Laboratory of Crop Genetic Improvement, Huazhong Agricultural University, Wuhan, China.ORCID 0000-0002-1540-0598
Lizhong XiongNational Key Laboratory of Crop Genetic Improvement, Huazhong Agricultural University, Wuhan, China.ORCID 0000-0003-0490-1474
Aiqing YouHubei Hongshan Laboratory, Huazhong Agricultural University, Wuhan, China. aq_you@hbaas.com.ORCID 0009-0001-0679-8522
Yuqing HeNational Key Laboratory of Crop Genetic Improvement, Huazhong Agricultural University, Wuhan, China. yqhe@mail.hzau.edu.cn.ORCID 0000-0002-4855-5991

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Improving both eating quality and yield remains a major challenge in rice breeding. Here, we identify Ghd7 as the causal gene underlying the grain amylose content QTL qAC7 and reveal Ghd7-triggered transcriptional regulation that balances starch and protein to coordinate yield and quality. Ghd7 transcriptionally activates PCF3 and exhibits dominant epistasis over it. A natural TA/T variant in PCF3 determines its DNA-binding affinity: the PCF3‑T allele strongly represses OsNF-YC4, increasing starch and reducing protein in grain, whereas PCF3‑TA fails to exert this repressive effect. Haplotype and evolutionary analyses show that the favorable allele PCF3‑T has not been selected. Combining Ghd7‑1/4 with PCF3‑T further enhances both yield and eating quality. Our findings uncover a possible transcriptional cascade and highlight Ghd7‑1/4 and PCF3‑T as promising targets for simultaneously improving rice yield and quality.

Indexed as

Gene Expression Regulation, PlantOryzaPlant ProteinsAllelesAmyloseEdible GrainEpistasis, GeneticHaplotypesPlant BreedingPlants, Genetically ModifiedQuantitative Trait LociStarchTranscription, GeneticAmylosePlant ProteinsStarch

Identifiers

PMID42844268
PMCPMC13645721

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.