Evidence map›Paper›PMID 42842192›Full record

ArticleMagma (New York, N.Y.)2026

Phantom-based synthetic renal PCASL data generation for overcoming data scarcity and enhancing deep learning-based segmentation.

Anne Oyarzun-Domeño, Rebeca Echeverria-Chasco, María A Fernández-Seara, Paloma L Martin-Moreno, Nuria Garcia-Fernandez, Gorka Bastarrika, Arantxa Villanueva, Frank G Zöllner

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Article in Magma (New York, N.Y.), 2026. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

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1 · What the graph read from it

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The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

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3 · Its place in the literature

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4 · The record

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5 · Who and what money

Authors and funding

8 authors.

Anne Oyarzun-DomeñoComputer Assisted Clinical Medicine, Medical Faculty Mannheim, Heidelberg University, Heidelberg, Germany.ORCID http://orcid.org/0000-0003-1226-0929
Rebeca Echeverria-ChascoIdiSNA, Health Research Institute of Navarra, 31008, Pamplona, Spain.
María A Fernández-SearaIdiSNA, Health Research Institute of Navarra, 31008, Pamplona, Spain.
Paloma L Martin-MorenoIdiSNA, Health Research Institute of Navarra, 31008, Pamplona, Spain.
Nuria Garcia-FernandezIdiSNA, Health Research Institute of Navarra, 31008, Pamplona, Spain.
Gorka BastarrikaIdiSNA, Health Research Institute of Navarra, 31008, Pamplona, Spain.
Arantxa VillanuevaElectrical Electronics and Communications Engineering, Public University of Navarre, 31006, Pamplona, Spain. avilla@unavarra.es.
Frank G ZöllnerComputer Assisted Clinical Medicine, Medical Faculty Mannheim, Heidelberg University, Heidelberg, Germany.

Funding

BonaRes 01KU2102Departamento de Educación, Gobierno de Navarra 0011-0537-2021-000050Departamento de Educación, Gobierno de Navarra PC181-182 RM-RENAL
6 · The paper itself

Abstract

objectivesWe hypothesize that a 2D CycleGAN framework can generate anatomically realistic synthetic renal PCASL images from phantom to overcome data scarcity and improve deep learning-based segmentation models. MATERIALS AND

methodsA CycleGAN was implemented for style transfer from XCAT phantoms to PCASL. Datasets included 16 transplanted (TK) and 14 healthy (HK) subjects (3T Siemens Skyra). The synthetic dataset was used both to fine-tune existing models and to enable multi-class segmentation (cortex/medulla) in real images via a model trained exclusively on synthetic data, addressing the lack of labels.

resultIn HK, the mixed model (real + synthetic data) significantly improved segmentation (mean DSC increase:, p < 0.05). For isolated left HK, the synthetic-only model achieved the highest gain (p < 0.001). In TK, synthetic data alone was less effective (p > 0.05), but the mixed model maintained baseline performance (p < 0.05). Furthermore, training the Mask R-CNN exclusively on synthetic data enabled successful segmentation of the cortex (DSC: 0.659) and medulla in real images. DISCUSSION: Synthetic data enhances generalization and enables complex compartment segmentation. Our results demonstrate that GAN-based data augmentation significantly enhances segmentation in PCASL imaging, providing a robust and scalable solution for low-resource clinical settings.

Indexed as

CortexGenerative adversarial networkImage segmentationKidneyMagnetic resonance imagingMedullaNeural networks

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.