Evidence map›Paper›PMID 42841227›Full record

ArticleAging cell2026

Age-Associated Gut Microbiota Dysbiosis Impairs Antiviral Defense During Influenza Virus Infection and Identifies Acetate as a Protective Mediator in Senescent Human Lung Cells.

Christoph Wernike, Antje Häder, Yasmina Reisser, Kiana Garakani, Franziska Hornung, Claude Jourdan Le Saux, Stefanie Deinhardt-Emmer

Abstract read
In one paragraph

Article in Aging cell, 2026. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
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1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors.

Christoph WernikeInstitute of Medical Microbiology, Jena University Hospital, Jena, Germany.
Antje HäderInstitute of Medical Microbiology, Jena University Hospital, Jena, Germany.ORCID https://orcid.org/0000-0001-8496-1754
Yasmina ReisserInstitute of Medical Microbiology, Jena University Hospital, Jena, Germany.ORCID https://orcid.org/0009-0007-9757-5036
Kiana GarakaniMedicine/Pulmonary and Critical Care Division, University of California San Francisco, San Francisco, California, USA.ORCID https://orcid.org/0000-0003-0739-4666
Franziska HornungInstitute of Medical Microbiology, Jena University Hospital, Jena, Germany.ORCID https://orcid.org/0000-0002-9942-5572
Claude Jourdan Le SauxMedicine/Pulmonary and Critical Care Division, University of California San Francisco, San Francisco, California, USA.ORCID https://orcid.org/0000-0002-6041-2870
Stefanie Deinhardt-EmmerInstitute of Medical Microbiology, Jena University Hospital, Jena, Germany.ORCID https://orcid.org/0000-0003-4495-4052

Funding

BMFTR 13N15466BMFTR 13N15704BMFTR 13N15745Else Kröner-Fresenius-Stiftung
6 · The paper itself

Abstract

Aging is associated with profound alterations in gut microbiota composition and function, including reduced production of short-chain fatty acids (SCFAs), yet it remains unclear whether these age-related microbial changes directly contribute to impaired antiviral defense during influenza A virus (IAV) infection. To address this question, we first characterized age-associated alterations of the gut microbiome and SCFA-related metabolic potential in a murine model of IAV infection. We then used a complementary human senescent lung fibroblast model to determine whether acetate, a major microbiota-derived SCFA, directly modulates antiviral responses in aging-associated lung cells. In old mice, IAV infection was associated with marked microbiota dysbiosis, including reduced abundance of SCFA-producing commensals such as Akkermansia muciniphila and Faecalibaculum rodentium, accompanied by decreased expression of microbial pathways involved in carbohydrate fermentation and acetate production. These findings suggested impaired microbiota-derived metabolic support of antiviral immunity during aging. Based on these observations, mechanistic studies in senescent human lung fibroblasts demonstrated that acetate supplementation significantly reduced viral replication and inflammatory responses. These protective effects were associated with FFAR2/FFAR3 signaling and enhanced histone H3 acetylation, indicating metabolic and epigenetic modulation of the antiviral response. Together, our findings establish a translational link between aging-associated gut microbiota dysfunction and impaired antiviral defense by combining a murine model of aging and influenza infection with mechanistic validation in human senescent lung cells. They identify acetate as a potential mediator of the gut-lung axis and support microbiota-targeted interventions to reduce influenza severity in older individuals.

Indexed as

AcetatesAgingCellular SenescenceDysbiosisGastrointestinal MicrobiomeInfluenza A virusInfluenza, HumanLungOrthomyxoviridae InfectionsAnimalsFatty Acids, VolatileHumansMiceMice, Inbred C57BLAcetatesFatty Acids, Volatileaginggut‐lung axisgut microbiomeinfluenza a virusshort‐chain fatty acids

Identifiers

PMID42841227
PMCPMC13643650

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.