Evidence map›Paper›PMID 42834407›Full record

ArticleGenome biology2026

A curated genome-scale nucleotide diversity panel of non-human primates.

Vasili Pankratov, Bjarke Meyer Pedersen, Erik Fogh Sørensen, Kasper Munch, Thomas Bataillon, Mikkel Heide Schierup, Juraj Bergman

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Article in Genome biology, 2026. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

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0citing papers in PubMed
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1 · What the graph read from it

What it found

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The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

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Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

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5 · Who and what money

Authors and funding

7 authors.

Vasili Pankratov *Section for Bioinformatics and Computational Biology, Department of Molecular Biology and Genetics, Aarhus University, Aarhus C, DK-8000 , Denmark.
Bjarke Meyer Pedersen *Section for Bioinformatics and Computational Biology, Department of Molecular Biology and Genetics, Aarhus University, Aarhus C, DK-8000 , Denmark.
Erik Fogh SørensenSection for Bioinformatics and Computational Biology, Department of Molecular Biology and Genetics, Aarhus University, Aarhus C, DK-8000 , Denmark.
Kasper MunchSection for Bioinformatics and Computational Biology, Department of Molecular Biology and Genetics, Aarhus University, Aarhus C, DK-8000 , Denmark.
Thomas BataillonSection for Bioinformatics and Computational Biology, Department of Molecular Biology and Genetics, Aarhus University, Aarhus C, DK-8000 , Denmark.
Mikkel Heide SchierupSection for Bioinformatics and Computational Biology, Department of Molecular Biology and Genetics, Aarhus University, Aarhus C, DK-8000 , Denmark.
Juraj BergmanSection for Bioinformatics and Computational Biology, Department of Molecular Biology and Genetics, Aarhus University, Aarhus C, DK-8000 , Denmark. jurajbergman@birc.au.dk.ORCID https://orcid.org/0000-0002-9415-2747

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

backgroundPrimates constitute one of the most phylogenetically and ecologically diverse eutherian mammalian orders and have a central role in advancing our knowledge of human evolution, speciation processes, and conservation biology. Although thousands of whole-genome sequences are available across many primate taxa, discrepancies in data processing-particularly the lack of ploidy-aware variant calling in sex-linked regions-have limited the utility of existing datasets for large-scale comparative analyses.

resultsHere, we use publicly available short-read sequencing data from non-human primates, recently published primate genome assemblies, and a ploidy-aware variant calling procedure to generate a genome-scale nucleotide diversity panel comprising 3,240 individuals from 269 species and 71 genera. To further facilitate cross-species comparisons, we generate a multiple-genome alignment of the primate assemblies used for variant calling.

conclusionsThis curated resource of non-human primate diversity provides a foundation for future research in primate evolutionary biology, speciation, and sex chromosome evolution.

Indexed as

Genetic VariationGenomePrimatesAnimalsBiocurationEvolution, MolecularGenomicsHumansPhylogenyComparative genomicsData resourceGenome-scale diversityNon-human primatesWhole-genome alignment

Identifiers

PMID42834407
PMCPMC13637242

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.