Evidence map›Paper›PMID 42832260›Full record

ArticleMicrobial genomics2026

Deep-sea Microbial Dataset of the Antarctic Ocean (dsMDAO): A high-resolution deep-sea microbial dataset of the Antarctic Ocean reveals potential for taxonomic and functional diversity.

Xingang Song, Shulei Jia, Lingling Chen, Chengjuan Cao, Zhongzhen Chen, Lingxiao Hang, Huihuang Jiang, Zhongwei Chen

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Article in Microbial genomics, 2026. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

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5 · Who and what money

Authors and funding

8 authors.

Xingang SongNantong Marine Center, Ministry of Natural Resources, Nantong, 226002, PR China.
Shulei JiaSchool of Basic Medical Sciences, Tianjin Medical University, Tianjin, 300070, PR China.
Lingling ChenSchool of Basic Medical Sciences, Tianjin Medical University, Tianjin, 300070, PR China.
Chengjuan CaoNantong Marine Center, Ministry of Natural Resources, Nantong, 226002, PR China.
Zhongzhen ChenHebei Carbon Investment Technology Development Co. Ltd, Shijiazhuang, 050000, PR China.
Lingxiao HangNantong Marine Center, Ministry of Natural Resources, Nantong, 226002, PR China.
Huihuang JiangNantong Marine Center, Ministry of Natural Resources, Nantong, 226002, PR China.
Zhongwei ChenNantong Marine Center, Ministry of Natural Resources, Nantong, 226002, PR China.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Antarctic deep-sea ecosystems harboured unique and metabolically versatile micro-organisms that sustained key biogeochemical processes under extreme polar conditions. However, the genomic diversity and ecological functions of these sedimentary or deep-sea microbial communities remained largely unexplored. Here, we constructed a comprehensive deep-sea microbial dataset of the Antarctic Ocean (dsMDAO) by integrating three newly sequenced Prydz Bay sediment metagenomes with 22 publicly available datasets (9 seawater and 13 sediment samples), spanning water depths of ~300-3500 m. Genome binning yielded 186 metagenome-assembled genomes spanning 19 phyla, including 175 bacteria and 11 archaea, a substantial proportion of which represent previously uncharacterized species. Meanwhile, reads mapping with the available standard Kraken2 database (k2_standard) enabled the expansion of species richness of the dsMDAO database. Furthermore, functional annotation revealed diverse metabolic and ecological potentials, including carbon, nitrogen and sulphur cycling, as well as secondary metabolite biosynthesis, virulence-associated defence and cold-adaptation mechanisms. Sediment microbiomes exhibited higher phylogenetic and functional diversity, enriched in

Indexed as

ArchaeaBacteriaMicrobiotaSeawaterAntarctic RegionsBiodiversityGeologic SedimentsMetagenomeMetagenomicsOceans and SeasPhylogenyAntarctic deep-sea microbiomefunctional gene datasetmetagenome-assembled genomes (MAGs)microbial diversity

Identifiers

PMID42832260
PMCPMC13638183

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.