Evidence map›Paper›PMID 42830333›Full record

ArticleNature communications2026

Heterogeneity in the response to the metabolic environment drives fosfomycin heteroresistance.

Jacob E Choby, David A Hufnagel, Muqing Ma, Tugba Ozturk, Victor I Band, Minsu Kim, David S Weiss

Abstract read
In one paragraph

Article in Nature communications, 2026. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

7 authors.

Jacob E Choby *Emory Antibiotic Resistance Center, Atlanta, GA, USA.ORCID 0000-0002-3077-0730
David A Hufnagel *Emory Antibiotic Resistance Center, Atlanta, GA, USA.
Muqing MaEmory Antibiotic Resistance Center, Atlanta, GA, USA.ORCID 0009-0001-1369-2689
Tugba OzturkEmory Antibiotic Resistance Center, Atlanta, GA, USA.
Victor I BandEmory Antibiotic Resistance Center, Atlanta, GA, USA.ORCID 0000-0001-9288-0188
Minsu KimEmory Antibiotic Resistance Center, Atlanta, GA, USA.ORCID 0000-0003-1594-4971
David S WeissEmory Antibiotic Resistance Center, Atlanta, GA, USA. david.weiss@emory.edu.

Funding

Yerkes National Primate Research Center Role of type-I IFN in regulating COVID-19 induced inflammation and pathogenesisP51OD011132 · OD · EMORY UNIVERSITY · PI Joon Sup Lee · 2012 to 2026
$167.0M
Single Cell Analysis Core (Core C)U19AI158080 · NIAID · EMORY UNIVERSITY · PI LEVIN, BRUCE RICHARD, WEISS, DAVID S · 2021 to 2025
$10.9M
BETA-LACTAMASE MUTATIONS IN ANTIBIOTIC RESISTANCER01AI032956 · NIAID · BAYLOR COLLEGE OF MEDICINE · PI Timothy Palzkill · 1992 to 2026
$6.5M
Beta Lactamase Mutations in Antibiotic ResistanceR37AI032956 · NIAID · BAYLOR COLLEGE OF MEDICINE · PI PALZKILL, TIMOTHY · 2001 to 2010
$3.3M
Heteroresistance Interdisciplinary Research Unit: Quantitative Analysis and Single-Cell Microscopy Core (Core C)P01AI197193 · NIAID · EMORY UNIVERSITY · PI DAVID S WEISS · 2026 to 2026
$2.9M
Research Training in Translational Gastroenterology and HepatologyT32DK108735 · NIDDK · EMORY UNIVERSITY · PI SUBRA KUGATHASAN · 2016 to 2026
$2.6M
Mechanisms of phenotypic antibiotic resistance in Gram-negative bacteriaR01AI141883 · NIAID · EMORY UNIVERSITY · PI WEISS, DAVID S · 2018 to 2022
$2.2M
Beta Lactamase Mutations in Antibiotic ResistanceR56AI032956 · NIAID · BAYLOR COLLEGE OF MEDICINE · PI PALZKILL, TIMOTHY · 2016 to 2016
$394k
Cystic Fibrosis Foundation (CF Foundation) CHOBY19F0NIAID NIH HHS P01 AI197193NIAID NIH HHS R01 AI032956NIAID NIH HHS R01 AI141883NIAID NIH HHS R37 AI032956NIAID NIH HHS R56 AI032956NIAID NIH HHS U19 AI158080NIDDK NIH HHS T32 DK108735NIH HHS P51 OD011132U.S. Department of Health & Human Services | NIH | National Institute of Allergy and Infectious Diseases (NIAID) AI141883U.S. Department of Health & Human Services | NIH | National Institute of Allergy and Infectious Diseases (NIAID) AI158080U.S. Department of Health & Human Services | NIH | National Institute of Allergy and Infectious Diseases (NIAID) AI197193U.S. Department of Health & Human Services | NIH | National Institute of Allergy and Infectious Diseases (NIAID) AI32956U.S. Department of Health & Human Services | NIH | National Institute of Diabetes and Digestive and Kidney Diseases (National Institute of Diabetes & Digestive & Kidney Diseases) T32 DK108735U.S. Department of Health & Human Services | NIH | NIH Office of the Director (OD) P51 OD011132
6 · The paper itself

Abstract

Heteroresistance is a form of antibiotic resistance in which a phenotypically unstable subpopulation of resistant cells coexists with a majority susceptible population. Many mechanisms of heteroresistance are unclear and the impact of the extracellular environment on this phenomenon is unknown. Studying fosfomycin heteroresistance in Enterobacter cloacae complex, we observed that glucose availability greatly increased the frequency of the resistant subpopulation. Glucose downregulated the glycerol and fosfomycin importer GlpT via catabolite repression. Heteroresistance was generated by heterogeneity in single-cell expression of GlpT, in addition to expression of fosA, which acted as a resistance enhancer. Due to the impact of environmental glucose on glpT expression, we observed that the resistant subpopulation was more frequent during infection in murine models of hyperglycemia/diabetes. Thus, we reveal a paradigm where heterogeneity in response to the environment tunes resistant subpopulation frequency, which suggests that the metabolic context of infection in specific disease states may be important to consider in treatment decisions.

Indexed as

Anti-Bacterial AgentsDrug Resistance, BacterialEnterobacter cloacaeFosfomycinAnimalsBacterial ProteinsGene Expression Regulation, BacterialGlucoseGlycerolMiceMicrobial Sensitivity TestsAnti-Bacterial AgentsBacterial ProteinsFosfomycinGlucoseGlycerol

Identifiers

PMID42830333
PMCPMC13635211

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.