Evidence map›Paper›PMID 42821028›Full record

ArticleWorld journal of microbiology & biotechnology2026

Isoelectric point stabilization and protein mass compression are associated with antimicrobial resistance in the genus Acinetobacter.

Ujwal Dahal, Archana Gautam, Pinky Arora, Mukti Ram Aryal, Mahesh Kc

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Article in World journal of microbiology & biotechnology, 2026. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

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1 · What the graph read from it

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2 · The registry

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3 · Its place in the literature

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4 · The record

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5 · Who and what money

Authors and funding

5 authors.

Ujwal DahalDepartment of Biochemistry, School of Bioengineering and Biosciences, Lovely Professional University, Punjab, 144411, India. ujwalbosc@gmail.com.ORCID http://orcid.org/0009-0005-1111-0955
Archana GautamSchool of Computer Application, Lovely Professional University, Punjab, 144411, India.
Pinky AroraDepartment of Biochemistry, School of Bioengineering and Biosciences, Lovely Professional University, Punjab, 144411, India.
Mukti Ram AryalDepartment of Botany, Trichandra Multiple Campus, Tribhuvan University, Kathmandu, 44600, Nepal.
Mahesh KcDepartment of Computer science, York st John University, 1 clove Crescent, London, E14 2BA, UK.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

introductionThe genus Acinetobacter is widely regarded as a major reservoir of antimicrobial resistance (AMR); however, the evolutionary distribution of resistance across the genus remains unclear. This study aimed to investigate phylogenomic structure and associated proteomic features underlying AMR distribution.

methodsA total 67 genomes including 65 representative Acinetobacter species, one additional Acinetobacter baumannii ATCC 19606 reference genome and Alkanindiges hydrocarboniclasticus as the outgroup were analyzed using a 174-gene core genome phylogeny. Resistome profiling was performed using homology-based screening, and proteome-wide properties, including isoelectric point (pI), molecular weight, and protein count, were statistically compared between antibiotic resistance gene (ARG) positive and ARG negative groups based on Resfinder Screening.

resultsPhylogenetic analysis revealed a clear partitioning into ARG positive and ARG negative clades with 28 lineages lacking detectable AMR determinants. A Chi-square test confirmed a significant association between evolutionary clades and resistome distribution (X2 = 29.69, p = 0.0052). While global pI values remained conserved, ARG positive lineages showed significantly reduced pI variance (p = 0.0054). Additionally, ARG positive lineages exhibited expanded proteomes (p < 0.0001) coupled with reduced average molecular weight (p = 0.0056), indicating a shift toward a more compact proteome architecture.

conclusionThese findings suggest that AMR evolution in Acinetobacter is associated with both genomic partitioning and distinct proteomic patterns. The presence of ARG-negative lineages and coordinated differences in proteome size, average molecular weight, and pI variance highlight the potential role of biophysical properties in shaping AMR-associated genomic variation, while the conserved global pI indicates that these differences do not reflect a shift in overall proteome pI. These findings provide a framework for further investigating biophysical features associated with emerging ARG-positive lineages.

Indexed as

AcinetobacterBacterial ProteinsDrug Resistance, BacterialAcinetobacter baumanniiAnti-Bacterial AgentsGenome, BacterialIsoelectric PointMicrobial Sensitivity TestsMolecular WeightPhylogenyProteomeProteomicsAnti-Bacterial AgentsBacterial ProteinsProteomeAcinetobacterAntimicrobial resistanceCore genomeIsoelectric pointPhylogenomics

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.