Evidence map›Paper›PMID 42820896›Full record

ArticleThe Journal of allergy and clinical immunology2026

SERPINE1 promoter variants and differential airway responses to virus and biological therapy.

Ariel Helms Thames, Madeline Schutt, Samantha Gadd, Leonardo Barrera, Seong Cho, William Wentworth-Sheilds, Jacqueline Pongracic, Andrew H Liu, Rebecca Gruchalla, Carolyn Kercsmar and 18 more

Abstract read
In one paragraph

Article in The Journal of allergy and clinical immunology, 2026. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

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0citing papers in PubMed
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1 · What the graph read from it

What it found

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2 · The registry

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3 · Its place in the literature

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4 · The record

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5 · Who and what money

Authors and funding

28 authors.

Ariel Helms ThamesDepartment of Pediatrics, and Stanley Manne Children's Research Institute, Ann and Robert H. Lurie Children's Hospital of Chicago, Northwestern University, Chicago, Ill; Medical Scientist Training Program, Northwestern University Feinberg School of Medicine, Chicago, Ill; Division of Allergy and Immunology, Department of Medicine, Feinberg School of Medicine, Northwestern University, Chicago, Ill.
Madeline SchuttDepartment of Pediatrics, and Stanley Manne Children's Research Institute, Ann and Robert H. Lurie Children's Hospital of Chicago, Northwestern University, Chicago, Ill.
Samantha GaddDepartment of Pediatrics, and Stanley Manne Children's Research Institute, Ann and Robert H. Lurie Children's Hospital of Chicago, Northwestern University, Chicago, Ill.
Leonardo BarreraDepartment of Pediatrics, and Stanley Manne Children's Research Institute, Ann and Robert H. Lurie Children's Hospital of Chicago, Northwestern University, Chicago, Ill.
Seong ChoDivision of Allergy-Immunology, Department of Internal Medicine, University of South Florida Morsani College of Medicine, Tampa, Fla.
William Wentworth-SheildsDepartment of Human Genetics, University of Chicago, Chicago, Ill.
Jacqueline PongracicDepartment of Pediatrics, and Stanley Manne Children's Research Institute, Ann and Robert H. Lurie Children's Hospital of Chicago, Northwestern University, Chicago, Ill.
Andrew H LiuSection of Pediatric Pulmonary and Sleep Medicine, Children's Hospital Colorado, University of Colorado School of Medicine, Aurora, Colo.
Rebecca GruchallaDepartment of Medicine, University of Texas Southwestern Medical Center, Dallas, Tex.
Carolyn KercsmarDivision of Asthma Research, Cincinnati Children's Hospital Medical Center, Cincinnati, Ohio.
Gurjit Khurana HersheyDivision of Asthma Research, Cincinnati Children's Hospital Medical Center, Cincinnati, Ohio.
Edward ZorattiDepartment of Medicine, Henry Ford Health System, Detroit, Mich.
Christine JohnsonDepartment of Medicine, Henry Ford Health System, Detroit, Mich.
Stephen TeachChildren's National Hospital, George Washington University School of Medicine and Health Sciences, Washington, DC.
Meyer KattanColumbia University College of Physicians and Surgeons, New York, NY.
Michael NodzenskiRho Inc, Durham, NC.
Courtney GaberinoDepartment of Pediatrics, University of Wisconsin School of Medicine and Public Health, Madison, Wis.
Leonard BacharierMonroe Carell Jr Children's Hospital at Vanderbilt University Medical Center, Nashville, Tenn.
George T O'ConnorPulmonary Center, Boston University School of Medicine, Boston, Mass.
James GernDepartment of Pediatrics, University of Wisconsin School of Medicine and Public Health, Madison, Wis.
Cynthia VisnessRho Inc, Durham, NC.
Amaziah ColemanNational Institutes of Health, National Institute of Allergy and Infectious Diseases, Rockville, Md.
Peter GergenNational Institutes of Health, National Institute of Allergy and Infectious Diseases, Rockville, Md.
Patrice BeckerNational Institutes of Health, National Institute of Allergy and Infectious Diseases, Rockville, Md.
Carole OberDepartment of Human Genetics, University of Chicago, Chicago, Ill.
Daniel JacksonDepartment of Pediatrics, University of Wisconsin School of Medicine and Public Health, Madison, Wis.
Matthew AltmanDepartment of Medicine, University of Washington, Seattle, Wash; Immunology Division, Benaroya Research Institute, Seattle, Wash.
Rajesh KumarDepartment of Pediatrics, and Stanley Manne Children's Research Institute, Ann and Robert H. Lurie Children's Hospital of Chicago, Northwestern University, Chicago, Ill. Electronic address: rkumar@luriechildrens.org.

Funding

Transplantation GroupUM2AI117870 · NIAID · RHO FEDERAL SYSTEMS DIVISION, INC. · PI DAVID, GLORIA · 2015 to 2023
$208.1M
Inner City Asthma consortium 3 (ICAC3)UM1AI114271 · NIAID · UNIVERSITY OF WISCONSIN-MADISON · PI GERN, JAMES E., JACKSON, DANIEL J · 2014 to 2021
$79.4M
Northwestern University Clinical and Translational Science Institute (NUCATS)UL1TR001422 · NCATS · NORTHWESTERN UNIVERSITY AT CHICAGO · PI D'AQUILA, RICHARD · 2015 to 2023
$56.8M
NIH Prior Approval Process ProfessionalUL1TR002535 · NCATS · UNIVERSITY OF COLORADO DENVER · PI SOKOL, RONALD J. · 2018 to 2022
$51.1M
Childhood Asthma in Urban Settings Leadership Center Administrative Supplement for URECA Yr4UM1AI160040 · NIAID · UNIVERSITY OF WISCONSIN-MADISON · PI James E. Gern, DANIEL J JACKSON · 2021 to 2026
$41.1M
LCenter for Clinical and Translational Science and TrainingUL1TR001425 · NCATS · UNIVERSITY OF CINCINNATI · PI HEUBI, JAMES E., KISSELA, BRETT M · 2015 to 2024
$37.5M
Clinical and Translational Science Institute at Childrens NationalUL1TR001876 · NCATS · CHILDREN'S RESEARCH INSTITUTE · PI BELL, MICHAEL J · 2016 to 2021
$25.6M
MULTIDISCIPLINARY CLINICAL AND TRANSLATIONAL SCIENCE (MCTS) PROGRAM (UL1)UL1RR025741 · NCRR · NORTHWESTERN UNIVERSITY AT CHICAGO · PI GREENLAND, PHILIP · 2008 to 2011
$24.7M
Multidisciplinary Clinical and Translational Science (MCTS) Program (UL1)UL1TR000150 · NCATS · NORTHWESTERN UNIVERSITY AT CHICAGO · PI LLOYD-JONES, DONALD M · 2012 to 2013
$10.1M
Soy Isoflavones for Inner City Infants at Risk for Asthma (SIRA)U01AI160018 · NIAID · LURIE CHILDREN'S HOSPITAL OF CHICAGO · PI RAJESH KUMAR · 2021 to 2026
$2.7M
Physical Activity and Dose of Air Pollution in Pediatric Urban Asthma: Impact of Minute VentilationK01HL140216 · NHLBI · COLUMBIA UNIVERSITY HEALTH SCIENCES · PI LOVINSKY-DESIR, STEPHANIE · 2018 to 2021
$692k
NCATS NIH HHS UL1 TR000150NCATS NIH HHS UL1 TR001422NCATS NIH HHS UL1 TR001425NCATS NIH HHS UL1 TR001876NCATS NIH HHS UL1 TR002535NCRR NIH HHS UL1 RR025741NHLBI NIH HHS K01 HL140216NIAID NIH HHS U01 AI160018NIAID NIH HHS UM1 AI114271NIAID NIH HHS UM1 AI160040NIAID NIH HHS UM2 AI117870
6 · The paper itself

Abstract

backgroundA common functional promoter polymorphism (4G4G/4G5G) in the SERPINE1 gene, which encodes the plasminogen activator inhibitor 1 (PAI-1) protein, is associated with more frequent asthma exacerbations.

objectiveWe examined genotype-specific airway transcriptomic responses during viral illness and how genotype modulates these responses in asthma exacerbations with and without mepolizumab treatment.

methodsNasal lavage samples from a subset of children aged 6-17 years with exacerbation-prone asthma from the type 2-enriched urban asthma MUPPITS-1 and MUPPITS-2 cohorts were used for RNA sequencing and genetic studies. Expression quantitative trait locus (eQTL) analysis and weighted gene coexpression network analysis were performed to determine PAI-1 genotype modulation of gene expression during viral illness and genotype associations with mean expression levels of coexpressed networks of genes (modules). Linear regression analysis was performed to evaluate interactions between mepolizumab and the PAI-1 promoter variants.

resultsRisk genotypes were associated with lower SERPINE1 expression at baseline but higher levels over the course of viral illness (P < .02). In those with the risk allele at times of viral illness, there was increased expression of 4 coexpressed networks of genes including immune/Toll-like receptor signaling, and decreased expression of one network (ribosome). Subjects with the risk allele receiving mepolizumab with nonexacerbation viral illness had higher expression of eosinophil and mucus hypersecretion gene networks. In subjects with the risk allele receiving mepolizumab who experienced exacerbation, eosinophilic signaling networks were decreased, but gene networks involved in TGF-β/SMAD3 and perturbed epithelial integrity were increased compared to placebo. A number of drug-gene interactions were significant (P < .05, false discovery rate).

conclusionsNasal lavage SERPINE1 transcripts increase during viral illness in children with asthma who have the risk allele but not in children without this allele. In asthma exacerbations, the risk allele is associated with augmentation of TGF-β/SMAD3 and epithelial pathways as well as a differential airway transcriptomic response to the type 2 modulator mepolizumab.

Indexed as

asthmadifferential gene expressionPAI-1Transcriptomics

Identifiers

PMID42820896
PMCPMC13632648

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.