Evidence map›Paper›PMID 42818517›Full record

ArticleArXiv2026

Population-scale Ancestral Recombination Graphs with tskit 1.0.

Ben Jeffery, Yan Wong, Kevin Thornton, Georgia Tsambos, Gertjan Bisschop, Yun Deng, E Castedo Ellerman, Thomas B Forest, Halley Fritze, Daniel Goldstein and 42 more

Abstract readPreprint
In one paragraph

Article in ArXiv, 2026. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

52 authors.

Ben JefferyBig Data Institute, Li Ka Shing Centre for Health Information and Discovery, University of Oxford, OX3 7LF, UK.
Yan WongBig Data Institute, Li Ka Shing Centre for Health Information and Discovery, University of Oxford, OX3 7LF, UK.
Kevin ThorntonDepartment of Systems Biology, University of California, Irvine, CA 92697, USA.
Georgia TsambosMelbourne Integrative Genomics, School of Mathematics and Statistics, University of Melbourne, Victoria, 3010, Australia.
Gertjan BisschopBig Data Institute, Li Ka Shing Centre for Health Information and Discovery, University of Oxford, OX3 7LF, UK.
Yun DengDepartment of Genetics, Stanford University, Stanford, CA 94305, USA.
E Castedo EllermanFresh Pond Research Institute, Cambridge, MA 02140, USA.
Thomas B ForestInstitute of Ecology and Evolution, University of Oregon, Eugene OR 97402, USA.
Halley FritzeDepartment of Statistics, University of Michigan, Ann Arbor, MI, 48109, USA.
Daniel GoldsteinKhoury College of Computer Sciences, Northeastern University, MA 02115, USA.
Gregor GorjancThe Roslin Institute and Royal (Dick) School of Veterinary Studies, University of Edinburgh, EH25 9RG, UK.
Graham GowerMicrobiology and Infectious Diseases, SA Pathology, Adelaide, SA 5000, Australia.
Simon GravelDepartment of Human Genetics, McGill University, Montreal, QC H3A 0C7, Canada.
Jeremy GuezUMR 7206 Eco-Anthropologie, CNRS, MNHN, Université Paris Cité, 75116 Paris, France.
Benjamin C HallerDept. of Computational Biology, Cornell University, Ithaca, NY 14853, USA.
Andrew D KernInstitute of Ecology and Evolution, University of Oregon, Eugene OR 97402, USA.
Lloyd KirkDepartment of Integrative Biology, University of Wisconsin-Madison, WI 53706, USA.
Ivan KrukovDepartment of Human Genetics, McGill University, Montreal, QC H3A 0C7, Canada.
Hanbin LeeDepartment of Statistics, University of Michigan, Ann Arbor, MI, 48109, USA.
Brieuc LehmannDepartment of Statistical Science, University College London, London, WC1E 7HB, UK.
Hossameldin LoayBig Data Institute, Li Ka Shing Centre for Health Information and Discovery, University of Oxford, OX3 7LF, UK.
Matthew M OsmondDepartment of Ecology and Evolutionary Biology, University of Toronto, Toronto, Ontario, M5S 3B2, Canada.
Duncan S PalmerDepartment of Statistics, University of Oxford, OX1 3LB, UK.
Nathaniel S PopeInstitute of Ecology and Evolution, University of Oregon, Eugene OR 97402, USA.
Aaron P RagsdaleDepartment of Integrative Biology, University of Wisconsin-Madison, WI 53706, USA.
Duncan RobertsonBig Data Institute, Li Ka Shing Centre for Health Information and Discovery, University of Oxford, OX3 7LF, UK.
Murillo F RodriguesInstitute of Ecology and Evolution, University of Oregon, Eugene OR 97402, USA.
Hugo van KemenadeIndependent researcher.
Clemens L WeißDepartment of Genetics, Stanford University School of Medicine, Stanford, CA 94305, USA.
Anthony Wilder WohnsDepartment of Genetics, Stanford University School of Medicine, Stanford, CA 94305, USA.
Shing H ZhanBig Data Institute, Li Ka Shing Centre for Health Information and Discovery, University of Oxford, OX3 7LF, UK.
Brian C ZhangDepartment of Statistics, University of Oxford, OX1 3LB, UK.
Marianne AspburyDepartment of Paediatrics, University of Oxford, Oxford, UK.
Nikolas A BayaBig Data Institute, Li Ka Shing Centre for Health Information and Discovery, University of Oxford, OX3 7LF, UK.
Saurabh BelsareInstitute of Ecology and Evolution, University of Oregon, Eugene OR 97402, USA.
Arjun BiddandaDepartment of Biology, Johns Hopkins University, Baltimore, MD, 21218, USA.
Francisco Campuzano JiménezDepartment of Biology, University of Antwerp, Antwerp, 2610, Belgium.
Ariella GladsteinDepartment of Human Genetics, University of California, Los Angeles, CA 90095, USA.
Bing GuoCenter for Vaccine Development and Global Health, University of Maryland School of Medicine, Baltimore, MD, 21201, USA.
Savita KarthikeyanBig Data Institute, Li Ka Shing Centre for Health Information and Discovery, University of Oxford, OX3 7LF, UK.
Warren W KretzschmarCenter for Hematology and Regenerative Medicine, Karolinska Institute, 141 83 Huddinge, Sweden.
Inés RebolloInstituto Nacional de Investigacíon Agropecuaria (INIA), Estacíon Experimental Las Brujas, Ruta 48 km 10, Canelones, Uruguay.
Kumar SaunackIndependent researcher.
Ruhollah ShemiraniInstitute for Genomic Health, Icahn School of Medicine at Mount Sinai, NY, 10029, USA.
Alexis SimonSorbonne Université, CNRS, UMR 7144 AD2M, DiSEEM, Station Biologique de Roscoff, France.
Chris SmithInstitute of Ecology and Evolution, University of Oregon, Eugene OR 97402, USA.
Jeet SukumaranBiology Department, San Diego State University, San Diego, CA 92182-4614, USA.
Jonathan TerhorstDepartment of Statistics, University of Michigan, Ann Arbor, MI, 48109, USA.
Per UnnebergDepartment of Cell and Molecular Biology, National Bioinformatics Infrastructure Sweden, Science for Life Laboratory, Uppsala University, Husargatan 3, SE-752 37 Uppsala, Sweden.
Ao ZhangBig Data Institute, Li Ka Shing Centre for Health Information and Discovery, University of Oxford, OX3 7LF, UK.
Peter RalphInstitute of Ecology and Evolution, University of Oregon, Eugene OR 97402, USA.
Jerome KelleherBig Data Institute, Li Ka Shing Centre for Health Information and Discovery, University of Oxford, OX3 7LF, UK.

Funding

Scaling up computational genomics with tree sequencesR01HG012473 · NHGRI · UNIVERSITY OF OREGON · PI PETER Lochhead RALPH · 2023 to 2026
$2.3M
Scaling up computational genomics with tree sequencesR56HG011395 · NHGRI · UNIVERSITY OF OREGON · PI RALPH, PETER LOCHHEAD · 2021 to 2021
$557k
NHGRI NIH HHS R01 HG012473NHGRI NIH HHS R56 HG011395
6 · The paper itself

Abstract

PubMed holds no abstract for this paper.

Identifiers

PMID42818517
PMCPMC13622864

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.