Evidence map›Paper›PMID 42814608›Full record

ArticleeLife2026

Biophysically inspired mean-field model of neuronal populations driven by ion-exchange mechanisms.

Giovanni Rabuffo, Abhirup Bandyopadhyay, Carmela Calabrese, Kashyap Gudibanda, Damien Depannemaecker, Lavinia Mitiko Takarabe, Sourin Chatterjee, Maria Luisa Saggio, Mathieu Desroches, Anton Ivanov and 4 more

Abstract read
In one paragraph

Article in eLife, 2026. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed.

  1. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

14 authors.

Giovanni Rabuffo *Aix Marseille University, Institut de Neurosciences des Systèmes, UMR 1106, INSERM, Marseille, France.ORCID https://orcid.org/0000-0003-3947-1662
Abhirup Bandyopadhyay *Aix Marseille University, Institut de Neurosciences des Systèmes, UMR 1106, INSERM, Marseille, France.
Carmela CalabreseAix Marseille University, Institut de Neurosciences des Systèmes, UMR 1106, INSERM, Marseille, France.
Kashyap GudibandaAix Marseille University, Institut de Neurosciences des Systèmes, UMR 1106, INSERM, Marseille, France.
Damien DepannemaeckerAix Marseille University, Institut de Neurosciences des Systèmes, UMR 1106, INSERM, Marseille, France.
Lavinia Mitiko TakarabeAix Marseille University, Institut de Neurosciences des Systèmes, UMR 1106, INSERM, Marseille, France.
Sourin ChatterjeeAix Marseille University, Institut de Neurosciences des Systèmes, UMR 1106, INSERM, Marseille, France.
Maria Luisa SaggioAix Marseille University, Institut de Neurosciences des Systèmes, UMR 1106, INSERM, Marseille, France.
Mathieu DesrochesMathNeuro, INRIA, University of Montpellier, Montpellier, France.ORCID https://orcid.org/0000-0002-9325-4207
Anton IvanovAix Marseille University, Institut de Neurosciences des Systèmes, UMR 1106, INSERM, Marseille, France.
Marja-Leena LinneFaculty of Medicine and Health Technology, Tampere University, Tampere, Finland.ORCID https://orcid.org/0000-0003-2577-7329
Christophe BernardAix Marseille University, Institut de Neurosciences des Systèmes, UMR 1106, INSERM, Marseille, France.ORCID https://orcid.org/0000-0003-3014-1966
Spase Petkoski *Aix Marseille University, Institut de Neurosciences des Systèmes, UMR 1106, INSERM, Marseille, France.ORCID https://orcid.org/0000-0003-4540-6293
Viktor Jirsa *Aix Marseille University, Institut de Neurosciences des Systèmes, UMR 1106, INSERM, Marseille, France.ORCID https://orcid.org/0000-0002-8251-8860

Funding

Agence Nationale de la Recherche 10.67599/anr-22-pesn-0012Agence Nationale de la Recherche 10.67599/anr-24-rrii-0005Agence Nationale de la Recherche ANR-17-CE37-0001-01Agence Nationale de la Recherche ANR-20-NEUC-0005-02Agencia Estatal de Investigación BCAM Severo Ochoa accreditation CEX2021-001142-S / MICIU / AEI / 10.13039/501100011033Eusko Jaurlaritza BERC 2022-2025Horizon 2020 Framework Programme 10.3030/101137289Horizon 2020 Framework Programme 10.3030/101147319Horizon 2020 Framework Programme 10.3030/826421Horizon 2020 Framework Programme 10.3030/945539HORIZON EUROPE Marie Sklodowska-Curie Actions 10.3030/101199894
6 · The paper itself

Abstract

Whole-brain simulations are a valuable tool for gaining insight into the multiscale processes that regulate brain activity. Due to the complexity of the brain, it is impractical to include all microscopic details in a simulation. Hence, researchers often simulate the brain as a network of coupled neural masses, each described by a mean-field model. These models capture the essential features of neuronal populations while approximating most biophysical details. However, it may be important to include certain parameters that significantly impact brain function. The concentration of ions in the extracellular space is one key factor to consider, as its fluctuations can be associated with healthy and pathological brain states. In this paper, we develop a new mean-field model of a population of Hodgkin-Huxley-type neurons, retaining a microscopic perspective on the ion-exchange mechanisms driving neuronal activity. This allows us to maintain biophysical interpretability while bridging the gap between micro- and macro-scale mechanisms. Our model is able to reproduce a wide range of activity patterns, also observed in large neural network simulations. Specifically, slow-changing ion concentrations modulate the fast neuroelectric activity, a feature of our model that we validated through in vitro experiments. By studying how changes in extracellular ionic conditions can affect whole-brain dynamics, this model serves as a foundation to measure biomarkers of pathological activity and provide potential therapeutic targets in cases of brain dysfunctions like epilepsy.

Indexed as

BrainModels, NeurologicalNeuronsAction PotentialsAnimalsComputer SimulationIonsNerve NetIonsbiophysical neural massepilepsyHodgkin–Huxley-type neuronsmean-field modelmousemultiscale mechanismsneuroscience

Identifiers

PMID42814608
PMCPMC13626649

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.