Evidence map›Paper›PMID 42808964›Full record

ArticleCurrent protocols2026

Investigating CD8 T Cell Exhaustion in Chronic LCMV Infection by Flow Cytometry.

Dominique Stark, Marie-Elen Tuchel, Gautier Stehli, Alessandro Genovese, Isaak Quast, Annette Oxenius

Abstract read
In one paragraph

Article in Current protocols, 2026. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors.

Dominique StarkInstitute of Microbiology, ETH Zurich, Zurich, Switzerland.ORCID https://orcid.org/0000-0002-3214-7950
Marie-Elen TuchelInstitute of Microbiology, ETH Zurich, Zurich, Switzerland.ORCID https://orcid.org/0009-0008-9342-3454
Gautier StehliInstitute of Microbiology, ETH Zurich, Zurich, Switzerland.ORCID https://orcid.org/0000-0002-4764-2401
Alessandro GenoveseInstitute of Microbiology, ETH Zurich, Zurich, Switzerland.ORCID https://orcid.org/0000-0002-2243-8420
Isaak QuastInstitute of Microbiology, ETH Zurich, Zurich, Switzerland.ORCID https://orcid.org/0000-0001-6517-8537
Annette OxeniusInstitute of Microbiology, ETH Zurich, Zurich, Switzerland.ORCID https://orcid.org/0000-0002-2079-2354

Funding

Swiss National Science Foundation 310030_208024Swiss National Science Foundation 310030L_197642
6 · The paper itself

Abstract

CD8 T cells and the process of T cell exhaustion are central topics in both basic immunology and translational research, including clinical applications. Here, we provide a comprehensive, step-by-step guide to investigate CD8 T cells in murine in vivo lymphocytic choriomeningitis virus (LCMV) infection models. We outline viral stock preparation, infection, and viral titer evaluation. We put an emphasis on flow cytometry as a method to investigate phenotypical and functional characteristics of CD8 T cell exhaustion, but the protocols provided will also facilitate imaging or transcriptomic analyses. With these resources, we aim to streamline establishment of the LCMV model for new users and to support harmonization and optimization of workflows for laboratories already working with this model. © 2026 The Author(s). Current Protocols published by Wiley Periodicals LLC. Basic Protocol 1: Virus production Basic Protocol 2: Virus titer quantification from virus stocks by focus-forming assay Alternate Protocol 1: Virus titer quantification from infected tissues by focus-forming assay Basic Protocol 3: Peptide-MHC-I tetramer production Basic Protocol 4: Naïve CD8 T cell isolation using StemCell

Indexed as

CD8-Positive T-LymphocytesFlow CytometryLymphocytic ChoriomeningitisLymphocytic choriomeningitis virusAnimalsChronic DiseaseMiceMice, Inbred C57BLT-Cell Exhaustionadoptive cell transferCD8 T cell exhaustionchronic viral infectionhigh‐parameter flow cytometryLCMV

Identifiers

PMID42808964
PMCPMC13622406

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.