Evidence map›Paper›PMID 42799854›Full record

ArticleMethods in molecular biology (Clifton, N.J.)2027

Procedures for the Study of Botrytis cinerea Proteome.

Almudena Escobar-Niño, Olivier Coste, Maria Victoria Calcis-Marzán, Francisco Javier Fernandez-Acero

Abstract read
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In one paragraph

Article in Methods in molecular biology (Clifton, N.J.), 2027. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors.

Almudena Escobar-NiñoMicrobiology and Proteomics Laboratory, Institute for Viticulture and Agri-Food Research (IVAGRO), Faculty of Environmental and Marine Sciences, University of Cádiz,, 11510, Puerto Real, Spain.
Olivier CosteMicrobiology and Proteomics Laboratory, Institute for Viticulture and Agri-Food Research (IVAGRO), Faculty of Environmental and Marine Sciences, University of Cádiz,, 11510, Puerto Real, Spain.
Maria Victoria Calcis-MarzánMicrobiology and Proteomics Laboratory, Institute for Viticulture and Agri-Food Research (IVAGRO), Faculty of Environmental and Marine Sciences, University of Cádiz,, 11510, Puerto Real, Spain.
Francisco Javier Fernandez-AceroMicrobiology and Proteomics Laboratory, Institute for Viticulture and Agri-Food Research (IVAGRO), Faculty of Environmental and Marine Sciences, University of Cádiz,, 11510, Puerto Real, Spain. franciscojavier.fernandez@uca.es.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Proteomics has been revealed as a key set of technologies that provide a detailed description of the molecular processes involved in the development of a specific phenotype. "Omics" technologies can collect an incredible amount of information. Among them, proteomics is an invaluable tool for defining specific biological information by studying the complete set of proteins under specific conditions, the proteome; or specific subsets of proteins, the subproteome. It is a crucial instrument for describing protein post-translational modifications, the functional annotation of the genome, and the detection of orphan genes. Protein extraction procedures are necessary to obtain B. cinerea protein extracts of sufficient quality to be analyzed by LC-MS/MS, avoiding contaminants that interfere with the identification process. After experimental design, collect the samples and replicates as defined in each experimental approach; we will describe protocols and procedures for the next steps of proteome and subproteome extraction and LC-MS analysis.

Indexed as

BotrytisFungal ProteinsProteomeProteomicsChromatography, LiquidLiquid Chromatography-Mass SpectrometryProtein Processing, Post-TranslationalTandem Mass SpectrometryFungal ProteinsProteomeLC-MSOrbitrapProteomeSubproteome

Identifiers

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.