Evidence map›Paper›PMID 42799412›Full record

ArticleACS physical chemistry Au2026

Efficient Organic Molecular Crystal Structure Prediction Using the Density Functional Tight-Binding Method.

Maureen M Kitheka, Yan Jing, Yan Yao, Puja Goyal

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Article in ACS physical chemistry Au, 2026. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

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5 · Who and what money

Authors and funding

4 authors.

Maureen M KithekaDepartment of Chemistry, State University of New York at Binghamton, Binghamton, New York 13902, United States.
Yan JingDepartment of Electrical and Computer Engineering and Texas Center for Superconductivity (TcSUH), University of Houston, Houston, Texas 77204, United States.ORCID https://orcid.org/0000-0002-5669-4609
Yan YaoDepartment of Electrical and Computer Engineering and Texas Center for Superconductivity (TcSUH), University of Houston, Houston, Texas 77204, United States.ORCID https://orcid.org/0000-0002-8785-5030
Puja GoyalDepartment of Chemistry, State University of New York at Binghamton, Binghamton, New York 13902, United States.ORCID https://orcid.org/0000-0002-5812-0481

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Over the years, computational crystal structure prediction (CSP) for organic molecules has thrived as an area of research, spanning various scientific disciplines and having significant applications in industries such as pharmaceuticals and agrochemicals. Within the field of batteries, redox-active organic materials (ROMs) such as quinones have received increased attention as promising electrode materials for rechargeable batteries. However, experimental determination of the crystal structure of intermediate species formed during the discharge/charge cycle can often be challenging. Incomplete X-ray diffraction patterns can also lead to difficulties in crystal structure determination for ROMs used in batteries. Use of a semiempirical electronic structure method for CSP helps to avoid force field reparameterization for different species, sometimes with complex electronic structure, formed during battery operation. It also helps to significantly lower the computational cost compared to the widely used density functional theory (DFT). In this study, we report the success of a CSP algorithm based on a combination of the particle swarm optimization method, as implemented in the CALYPSO software, with third-order density functional tight-binding, a DFT-based semiempirical method. Accompanied by data postprocessing using DFT, this method enables the correct identification of the most stable crystal structures of organic molecules with different kinds of intermolecular interactions ranging from hydrogen bonding to π-stacking. We also report the experimental crystal structure of pyrene-4,5,9,10-tetrone, a molecule studied intensively for application in organic batteries, and predict its crystal structure correctly using our method. Our findings emphasize the potential of this approach for CSP of different classes of organic molecules, including quinones. Additionally, they establish the foundation for future CSP studies of other organic molecules utilized in rechargeable batteries.

Indexed as

CALYPSOcrystal structure predictiondensity-functional tight bindingDFTBparticle swarm optimizationpyrene-4,5,9,10-tetrone

Identifiers

PMID42799412
PMCPMC13614049

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