Evidence map›Paper›PMID 42799137›Full record

ArticleACS physical chemistry Au2026

Unraveling the Complex Hydrogen-Bonding and Solvation Patterns of Fructose Tautomers via Complementary AIMD and Classical MD Simulations.

Imre Bakó, Szilvia Pothoczki

Abstract read
In one paragraph

Article in ACS physical chemistry Au, 2026. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

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0citing papers in PubMed
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1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

2 authors.

Imre BakóHUN-REN Research Centre for Natural Sciences, Magyar tudósok körútja 2, Budapest H-1117, Hungary.
Szilvia PothoczkiHUN-REN Wigner Research Centre for Physics, Konkoly-Thege M. Út 29-33, Budapest H-1121, Hungary.ORCID https://orcid.org/0000-0003-4884-1813

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Understanding the molecular-level hydration of fructose tautomers remains a challenge due to their rapid interconversion and structural complexity. A dual-scale approach was employed, combining long-time classical molecular dynamics (MD) and ab initio molecular dynamics (AIMD) to elucidate differences in the hydrogen-bonding networks of both pyranose and furanose tautomers with statistical and electronic accuracy. Our simulations highlight the inherent competition between intra- and intermolecular hydrogen bonds, driven by the limited number of hydroxyl donor and acceptor sites. Crucially, the formation of these internal bonds is driven by ring puckering in the flexible furanoses alongside the spatial orientation of the hydroxymethyl groups in both tautomer families. This structural interplay indirectly influences the entire intermolecular solvation shell, comprising both hydrophilic and hydrophobic regions. By correlating these competing intra- and intermolecular patterns with Bader charges and water dipole moments, we establish a quantitative electronic-structure basis for carbohydrate solvation. These insights provide a comprehensive atomistic framework that deepens our understanding of biologically relevant processes, such as recognition and docking efficiency within metabolic enzymes.

Indexed as

ab initio molecular dynamics simulationsBader chargescarbohydrate solvationclassical molecular dynamics simulationdipole momentH-bonding

Identifiers

PMID42799137
PMCPMC13614054

What OpenQuestion holds

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Registered trials

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.