Evidence map›Paper›PMID 42795669›Full record

ReviewMicroorganisms2026

Ecological Management of Crown Gall-Affected Soils: Pathogen Reservoirs, Disease-Suppressive Microbiomes, and Helper Consortia.

Yaojie Shi, Yuewei Wu, Chao Li, Yuzhu Song

Abstract readReview
In one paragraph

Review in Microorganisms, 2026. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

4 authors.

Yaojie ShiResearch Center of Molecular Medicine of Yunnan Province, Faculty of Life Science and Technology, Kunming University of Science and Technology, Kunming 650500, China.
Yuewei WuResearch Center of Molecular Medicine of Yunnan Province, Faculty of Life Science and Technology, Kunming University of Science and Technology, Kunming 650500, China.
Chao LiResearch Center of Molecular Medicine of Yunnan Province, Faculty of Life Science and Technology, Kunming University of Science and Technology, Kunming 650500, China.ORCID 0000-0003-4240-1382
Yuzhu SongResearch Center of Molecular Medicine of Yunnan Province, Faculty of Life Science and Technology, Kunming University of Science and Technology, Kunming 650500, China.ORCID 0000-0002-9836-0252

Funding

Yunnan Province Science and Technology Department 202202AG050013Yunnan Province Science and Technology Department 202403AP140003Yunnan Province Science and Technology Department 202501CF070177Yunnan Province Science and Technology Department 202601AT070119Yunnan Province Science and Technology Department YNWR-QNBJ-2019-142
6 · The paper itself

Abstract

Crown gall remains difficult to manage because pathogenic agrobacteria can persist in soil, rhizosphere niches, infected roots, plant residues, and propagative materials, while repeated wounding creates new infection sites. This review examines how these reservoirs interact with soil and plant-associated microbiota to shape disease recurrence. Crown gall-specific studies show that gall and graft-union communities are spatially structured and identify pathogen competition, opine use, and virulence-related functions as processes that may shape disease-associated microbial assemblages. Evidence from better-characterized suppressive soils further identifies niche occupation, resource competition, bacterial-fungal interactions, and community stability as mechanisms worth testing in crown gall systems. Sanitation, wound protection, and single-strain biocontrol remain central to preventive management in nurseries and perennial production systems, whereas microbiome-based approaches remain complementary and experimental. Evaluation of locally adapted microbial consortia should consider pathogen rebound in infection-relevant niches, persistence of protective microorganisms, functional activity, new gall incidence, soil conditions, and non-target effects. Distinguishing crown gall-specific evidence from cross-pathosystem inference will help define testable mechanisms and appropriate criteria for field evaluation.

Indexed as

crown gall diseasedisease-suppressive soilshelper consortiaindigenous antagonistssoil microbiome

Identifiers

PMID42795669
PMCPMC13609791

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.