Evidence map›Paper›PMID 42791889›Full record

ArticleBioengineering (Basel, Switzerland)2026

Protect the Brain When Treating the Heart: Feasibility of 2.5D U-Net for Real-Time Gaseous Microemboli Detection.

Andrea Angino, Ken Trotti, Diego Ulisse Pizzagalli, Rolf Krause, Tiziano Torre, Stefanos Demertzis

Abstract read
In one paragraph

Article in Bioengineering (Basel, Switzerland), 2026. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

6 authors.

Andrea AnginoCenter for Computational Medicine in Cardiology (CCMC), Università della Svizzera Italiana (USI), 6900 Lugano, Switzerland.ORCID 0009-0000-8525-375X
Ken TrottiApplied Mathematics and Computational Science (AMCS), Computer, Electrical and Mathematical Sciences and Engineering (CEMSE) Division, King Abdullah University of Science and Technology (KAUST), Thuwal 23955-6900, Saudi Arabia.ORCID 0000-0002-5496-9445
Diego Ulisse PizzagalliFaculty of Biomedical Sciences, Università della Svizzera Italiana (USI), 6900 Lugano, Switzerland.ORCID 0000-0001-7158-5323
Rolf KrauseCenter for Computational Medicine in Cardiology (CCMC), Università della Svizzera Italiana (USI), 6900 Lugano, Switzerland.
Tiziano TorreCardiac Surgery Department, Cardiocentro Ticino Institute, Ente Ospedaliero Cantonale (EOC), 6900 Lugano, Switzerland.ORCID 0000-0002-8706-8563
Stefanos DemertzisFaculty of Biomedical Sciences, Università della Svizzera Italiana (USI), 6900 Lugano, Switzerland.ORCID 0000-0002-3796-1775

Funding

Swiss National Science Foundation 224943Swiss National Science Foundation 228512
6 · The paper itself

Abstract

Gaseous microemboli (GME) represent a common complication of cardiac structural interventions across both surgical and transcatheter approaches. Intraoperative transesophageal echocardiography (TEE) represents a convenient methodology to monitor and visualize the presence of circulating GME. However, their detection and quantification are far from trivial due to operator-dependent view, high velocity, and objects with similar structure in the background. Here, we propose a feasibility study based on a 2.5D U-Net architecture to detect GME in space-time connected data. We applied and tested such an architecture on a pilot dataset of eight TEE recordings (60 fps, 600×800 pixels) from eight different patients undergoing cardiac surgery, resulting in improved detection of moving GMEs against the background with respect to classical spot detection algorithms and 2D U-Net, yet retaining real-time execution speed with respect to more complex deep-learning architectures. Under leave-one-patient-out cross-validation, the selected model achieved strong detection performance under a three-pixel radius-tolerant grace-zone evaluation, with a precision of 92.55% and recall of 80.54%, corresponding to radius-tolerant Intersection over Union (IoU) and Dice coefficients of 73.95% and 84.13%, respectively. Complementarily, strict pixel-based segmentation metrics were also computed, yielding an IoU of 41.74% and a Dice coefficient of 57.98%. The selected model achieved an average inference time of 0.12 s per batch on the tested hardware. To assess specificity on unseen data, we additionally evaluated the model on an external GME-negative TEE dataset, where it produced predominantly empty or near-empty masks, indicating a low rate of spurious detections. These results support the technical feasibility of real-time GME segmentation, although broader clinical validation on larger multi-patient, multicenter datasets is still required.

Indexed as

biomedicinecardiac surgerycomputer visionechocardiographygaseous microembolireal-time segmentationU-Net

Identifiers

PMID42791889
PMCPMC13603343

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.