Evidence map›Paper›PMID 42791399›Full record

ArticleMetabolomics : Official journal of the Metabolomic Society2026

Systematic mass-spectrometry-guided metabolic fingerprinting elucidates diversity of specialized metabolites across the Brassicaceae.

Felicia C Wolters, Tina Woldu, M Eric Schranz, Marnix H Medema, Klaas Bouwmeester, Justin J J van der Hooft

Abstract read
In one paragraph

Article in Metabolomics : Official journal of the Metabolomic Society, 2026. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

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1citing papers in PubMed
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1 · What the graph read from it

What it found

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2 · The registry

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3 · Its place in the literature

Who cites it

1 citing paper in PubMed.

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4 · The record

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5 · Who and what money

Authors and funding

6 authors.

Felicia C WoltersBioinformatics Group, Wageningen University & Research, 6708PB, Wageningen, the Netherlands. felicia.wolters@wur.nl.ORCID https://orcid.org/0009-0001-3220-7204
Tina WolduBioinformatics Group, Wageningen University & Research, 6708PB, Wageningen, the Netherlands.
M Eric SchranzBiosystematics Group, Wageningen University & Research, 6708PB, Wageningen, the Netherlands.ORCID https://orcid.org/0000-0001-6777-6565
Marnix H MedemaBioinformatics Group, Wageningen University & Research, 6708PB, Wageningen, the Netherlands.ORCID https://orcid.org/0000-0002-2191-2821
Klaas Bouwmeester *Biosystematics Group, Wageningen University & Research, 6708PB, Wageningen, the Netherlands. klaas.bouwmeester@wur.nl.
Justin J J van der Hooft *Bioinformatics Group, Wageningen University & Research, 6708PB, Wageningen, the Netherlands. justin.vanderhooft@wur.nl.ORCID http://orcid.org/0000-0002-9340-5511

Funding

Netherlands Organization for Scientific Research (NWO) VI.Vidi.213.183
6 · The paper itself

Abstract

backgroundPlants produce diverse bouquets of specialized metabolites (SMs), yet only a fraction of the vast phytochemical space hasbeen explored to date.Comparative analysis of SM profiles can reveal hotspots of biochemical novelty, while systematic profilingacross taxonomic levels does presently not cover large plant families. MATERIALS AND

methodsTo study core and accessory SM profiles in the Brassicaceae plant family, we fingerprinted 14 species by Liquid-ChromatographyMass-Spectrometry (LC-MS/MS). We develop standardized experimental and computational workflows integrating in silicoannotation tools to study consensus compound class and substructure distributions of SMs. Furthermore, we investigate thecongruence of chemotaxonomy and species phylogeny across an extended panel of 17 species.

resultsUnique metabolite profiles were outstanding in Camelina sativa, Capsella rubella, and Barbarea vulgaris, with the largest uniqueterpenoid profile annotated in C. sativa, accounting for 33.5% and 55.6% in positive and negative ionization mode, respectively.Substructure motifs were found to overlap with compound class predictions, highlighted for triterpenoids in Camelinodae. Furthermore, dual-tissue chemotaxonomic clustering resembled relationships of Brassica nigra, B. oleracea, B. carinata, and B. juncea, and corresponding B and C subgenomes across tissues.

conclusionWe anticipate that our systematic approach can serve as a blueprint for investigating biochemical diversity in other plant lineagesand can boost the characterization of plant natural product pathways.

Indexed as

BrassicaceaeMetabolomicsLiquid Chromatography-Mass SpectrometryMetabolomePhylogenyTandem Mass SpectrometryBrassicaceaeChemotaxonomyComputational metabolomicsin silico annotationMetabolic fingerprintingSpecialized metabolitesTerpenes

Identifiers

PMID42791399
PMCPMC13615159

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.