ArticleFood chemistry: X2026
Multi-omics and machine learning reveal the mechanisms underlying cultivar-driven flavor differentiation in fermented ciba chili.
Article in Food chemistry: X, 2026. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.
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Abstract
Ciba chili quality is strongly influenced by raw material characteristics, but the cultivar-driven mechanisms underlying quality differentiation remain unclear. Ciba chili made from Inner Yellow New Generation (ICP), Lantern (LCP), and Devil's (DCP) peppers was comprehensively investigated using physicochemical analysis, GC-IMS, UHPLC-MS/MS untargeted metabolomics, 16S rRNA sequencing, and machine learning. Cultivar specificity profoundly shaped fermentation results. Volatile profiling revealed late-stage acid and ester enrichment in LCP, higher aldehyde retention alongside earlier ester formation in ICP, and an enrichment of alcohols, ketones, furans, and pyrazines in DCP. Furthermore, untargeted metabolomics showed that LCP, ICP, and DCP were enriched in organic oxygen-containing compounds, organic acids and organoheterocyclic compounds, and lipids and benzenoids, respectively. A random forest model utilizing these metabolites showed superior classification performance, and SHAP analysis further identified 20 core discriminatory metabolites contributing to cultivar classification. KEGG analysis traced flavor differentiation to phenylpropanoid metabolism, lipid oxidation, purine cofactor metabolism, and l-glutamine-mediated nitrogen metabolism. Cultivar-dependent bacterial succession was observed: DCP was dominated by
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