Evidence map›Paper›PMID 42785985›Full record

ArticleeNeuro2026

An Integrated Workflow for Long-Term Fiber Photometry Analysis.

Farina Pourmir, Jordan N Cook, Samantha O Sweck, Jeff R Jones

Abstract read
In one paragraph

Article in eNeuro, 2026. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

5 · Who and what money

Authors and funding

4 authors.

Farina PourmirDepartment of Biology, Texas A&M University, College Station, Texas 77843.
Jordan N CookInstitute for Neuroscience, Texas A&M University, College Station, Texas 77843.
Samantha O SweckInstitute for Neuroscience, Texas A&M University, College Station, Texas 77843.ORCID https://orcid.org/0000-0001-5435-1496
Jeff R JonesDepartment of Biology, Texas A&M University, College Station, Texas 77843 jjones@bio.tamu.edu.

Funding

Circadian output mechanisms in nocturnal and diurnal animalsR35GM151020 · NIGMS · TEXAS A&M UNIVERSITY · PI JEFFREY R JONES · 2023 to 2026
$1.9M
Circadian Encoding of Reward-Seeking Behavior in the Mesolimbic Dopamine PathwayF31DA065512 · NIDA · TEXAS A&M UNIVERSITY · PI Jordan Cook · 2026 to 2026
$42k
NIDA NIH HHS F31 DA065512NIGMS NIH HHS R35 GM151020
6 · The paper itself

Abstract

Long-term fiber photometry enables measurement of neural dynamics across hours to days, but these recordings create analytical and reproducibility challenges that are not well addressed by tools developed for short, stimulus-locked experiments. Here we present a software environment for long-term photometry analysis organized around a structured guided workflow for configuring, reviewing, executing, and inspecting analyses. The workflow makes consequential analysis choices visible by allowing correction strategies and event-detection settings to be previewed and configured for individual regions of interest before analysis. It supports both intermittent and continuous recordings and provides complementary views of corrected Δ

Indexed as

PhotometrySoftwareWorkflowAnimalsCalciumCircadian RhythmMaleMiceMice, Inbred C57BLReproducibility of ResultsCalciumcalcium imagingcircadian rhythmsfiber photometrylong-term recordingopen-source softwaresignal analysis

Identifiers

PMID42785985
PMCPMC13657667

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.