ArticleJournal of fungi (Basel, Switzerland)2026
Optimal Partitioning for Molecular Phylogenetic Inference and Generic Delimitation in the Cetrarioid Core Group (Parmeliaceae, Ascomycota).
Article in Journal of fungi (Basel, Switzerland), 2026. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.
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Abstract
The species diversity of lichenized fungi remains largely underestimated, yet the number of species in the cetrarioid core group of Parmeliaceae has remained stable while generic delimitations have been highly debated. Here, we performed a partitioned phylogenetic analysis incorporating secondary structure characters of three ribosomal loci (ITS, mtSSU, and nuLSU) combined with comprehensive phenotypic traits. Based on the results, we hypothesized that a Large Temporal Band (29.0-35.0 Mya) may serve as a baseline threshold for most generic divergences, corresponding to late-Oligocene global cooling and the primary cladogenesis of cetrarioid core lineages as documented in previous molecular dating studies. Additionally, we suggest a Small Temporal Band (14.0-18.0 Mya) for a subset of recently radiated genera that originated during the Mid-Miocene Climatic Optimum transition (~16 Mya). Two currently accepted genera (
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