Evidence map›Paper›PMID 42779721›Full record

ArticlebioRxiv : the preprint server for biology2026

Intravital pH Imaging using the sensor ApHID Reveals Incomplete Lysosomal Acidification in Resident Meningeal Phagocytes.

Santiago Solé-Domènech, Sung-Ji Ahn, Michael Iskols, Estibaliz Capetillo-Zarate, Lucy Funes, Jordi Pedragosa, Carles Justicia, Lynn-Marie Johnson, J David Warren, Anna Planas and 3 more

Abstract readPreprint
In one paragraph

Article in bioRxiv : the preprint server for biology, 2026. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

13 authors.

Santiago Solé-DomènechDepartment of Biochemistry and Biophysics, Weill Cornell Medicine, New York, United States.ORCID 0000-0002-7988-8983
Sung-Ji AhnFeil Family Brain and Mind Research Institute, Weill Cornell Medicine, New York, United States.ORCID 0000-0001-8836-8069
Michael IskolsDepartment of Biochemistry and Biophysics, Weill Cornell Medicine, New York, United States.ORCID 0000-0002-9996-4840
Estibaliz Capetillo-ZarateAchucarro Basque Center for Neuroscience, Leioa, Spain.ORCID 0000-0002-8416-0495
Lucy FunesDepartment of Biochemistry and Biophysics, Weill Cornell Medicine, New York, United States.ORCID 0000-0002-0807-0930
Jordi PedragosaBiomedical Research Institute of Barcelona, CSIC, Barcelona, Spain.ORCID 0000-0001-8493-4545
Carles JusticiaBiomedical Research Institute of Barcelona, CSIC, Barcelona, Spain.ORCID 0000-0003-0969-6158
Lynn-Marie JohnsonCornell Statistical Consulting Unit, Cornell University, 14853 Ithaca, United States.
J David WarrenDepartment of Biochemistry and Biophysics, Weill Cornell Medicine, New York, United States.ORCID 0000-0002-2833-2248
Anna PlanasBiomedical Research Institute of Barcelona, CSIC, Barcelona, Spain.ORCID 0000-0002-6147-1880
Josef AnratherFeil Family Brain and Mind Research Institute, Weill Cornell Medicine, New York, United States.
Costantino IadecolaFeil Family Brain and Mind Research Institute, Weill Cornell Medicine, New York, United States.ORCID 0000-0001-9797-073X
Frederick R MaxfieldDepartment of Biochemistry and Biophysics, Weill Cornell Medicine, New York, United States.ORCID 0000-0003-4396-8866

Funding

Macrophage-Lipoprotein InteractionsR01HL093324 · NHLBI · WEILL MEDICAL COLL OF CORNELL UNIV · PI MAXFIELD, FREDERICK R. · 2009 to 2025
$6.7M
Weill Cornell/Rockefeller/Sloan Kettering MST ProgramT32GM152349 · NIGMS · WEILL MEDICAL COLL OF CORNELL UNIV · PI KATHARINE C HSU · 2024 to 2026
$6.6M
Role of microglial lysosomes in amyloid-A-beta degradationRF1AG078244 · NIA · WEILL MEDICAL COLL OF CORNELL UNIV · PI MAXFIELD, FREDERICK R. · 2023 to 2023
$1.7M
NHLBI NIH HHS R01 HL093324NIA NIH HHS RF1 AG078244NIGMS NIH HHS T32 GM152349
6 · The paper itself

Abstract

Tracking lysosomes and quantifying their pH in the living, intact brain has been challenging owing to the lack of suitable in vivo tools. Here we report the use of dextran polymers labeled with the pH sensor ApHID to visualize and quantify lysosomal pH in resident phagocytes of the meninges. ApHID-dextrans delivered systemically are rapidly endocytosed by mainly dural and subdural macrophages and accumulate in lysosomal compartments. Intravital pH imaging revealed a striking heterogeneity in lysosomal acidification, with only ~5% of phagocytes reaching pH values below 5.0, in marked contrast with measurements in macrophage cell cultures. Photothrombotic ischemic lesions induced progressive lysosomal acidification in local phagocytes, while acute chloroquine treatment led to rapid alkalinization. Our methodology enables direct, quantitative pH measurements without genetic manipulations, and unveils a previously unappreciated heterogeneity in lysosomal acidification among phagocytic cells in the meninges.

Indexed as

ApHIDborder-associated macrophagesdextransduraintravital brain imaginglysosomal pHLysosomemeningespH sensors

Identifiers

PMID42779721
PMCPMC13596271

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.