Evidence map›Paper›PMID 42778863›Full record

ArticleMethods in molecular biology (Clifton, N.J.)2027

Identification of Domain Formation During sPLA2 Activity by Biophotonics.

Marta Susana Fernández Pacheco, Alba Adriana Vallejo-Cardona, Clara Patricia Rios-Ibarra

Abstract read
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Article in Methods in molecular biology (Clifton, N.J.), 2027. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

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0citing papers in PubMed
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1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

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Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors.

Marta Susana Fernández PachecoDepartment of Biochemistry, Centro de Investigación y de Estudios Avanzados del I.P.N. (CINVESTAV), Ave, Politécnico 2508, PO Box 14-740, Mexico City, 07000, Mexico.
Alba Adriana Vallejo-CardonaMedical and Pharmaceutical Biotechnology Unit, Center for Research and Assistance in Technology and Design of the State of Jalisco (CIATEJ), Av. Normalistas 800, Colinas de la Normal, Guadalajara, Jalisco, 44270, Mexico. avallejo@ciatej.mx.ORCID http://orcid.org/0000-0002-4568-3787
Clara Patricia Rios-IbarraResearch Consulting, Guadalajara, 44600, Jalisco, Mexico.ORCID http://orcid.org/0000-0002-6601-8030

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

The aim of this study was to identify the formation of membrane domains during the interfacial activation of pancreatic sPLA2 using fluorescence spectroscopy. The identification of phospholipase A2 (PLA2) activity by biphotonic methods is based on the behavior of fluorescent molecules present in the liposomal systems (enzyme-substrate). The liposomal system consists of a lipid membrane, which can be anything from a liposome to a cell membrane, and the PLA2 enzyme. Liposomes are biophysical models that can be used to study physicochemical processes, which boost the catalytic reaction at the heterogeneous interface between the aqueous phase (enzyme localization) and the lipid phase (substrate localization), for example, the study of membrane remodeling generated by the reaction products of PLA2. The PLA2 superfamily comprises a wide variety of enzymes that promote the hydrolysis of the sn-2 ester bond of phosphoglycerides. This enzyme is found in active form mainly in the pancreas but is distributed throughout the body in different organs and has been found to act during the effects of various chronic pathologies associated with some inflammatory responses. One of the fluorescent molecules used to identify the PLA2 catalysis reaction is C12-NBD-FA. The same molecule is also used as a monitor to detect the formation of domains during PLA2 activity, through the principle of the Forster resonance energy transfer (FRET) method, where a fluorescent acceptor molecule and a fluorescent donor molecule are chosen to measure the changes in fluorescence intensity in the system before and after the catalytic reaction. For this protocol, the fluorescent molecule octadecyl rhodamine chloride (C18-Rho) was chosen as the fluorescence acceptor and C12-NBD-FA as the donor to form the FRET pair. This protocol was performed on DPPC liposomes in gel or liquid crystalline state, and the changes in fluorescence were detected as a function of time at the donor emission length. The reversal in fluorescence that occurred while triggering the secretory PLA2 (sPLA2) activity was interpreted based on the change in transfer efficiency.

Indexed as

Phospholipases A2Phospholipases A2, SecretoryAnimalsFluorescence Resonance Energy TransferFluorescent DyesLiposomesPancreasSpectrometry, FluorescenceFluorescent DyesLiposomesPhospholipases A2Phospholipases A2, SecretoryBiophotonic methodC12-NBD-FAForster resonance energy transfer (FRET)Liposomal vesicle of DPPCPhospholipase A2 (PLA2) activity

Identifiers

PMID42778863

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.