Evidence map›Paper›PMID 42772734›Full record

ArticlePhysiologia plantarum

Persistent Epigenetic Reprogramming Is Associated With Contrasting Drought-Response Strategies in Citrus Scion-Rootstock Systems.

Monique Ayala Araújo da Silva, Fredson Dos Santos Menezes, Iris Sammarco, Lucas da Silva Costa, Claudia Fortes Ferreira, Soares Filho, Fabienne Micheli, Maurício Antônio Coelho-Filho, Abelmon da Silva Gesteira

Abstract read
In one paragraph

Article in Physiologia plantarum. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Cited by 1 paper.

0numbers the graph read from it
0cells of the map it votes in
1citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

1 citing paper in PubMed.

  1. Article
4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors.

Monique Ayala Araújo da SilvaDepartamento de Biologia, Centro de Genética e Biologia Molecular, Universidade Estadual de Santa Cruz, Ilhéus, Bahia, Brazil.ORCID https://orcid.org/0000-0002-1967-7703
Fredson Dos Santos MenezesDepartamento de Biologia, Centro de Genética e Biologia Molecular, Universidade Estadual de Santa Cruz, Ilhéus, Bahia, Brazil.ORCID https://orcid.org/0000-0002-1186-7924
Iris SammarcoInstitute of Botany, Czech Academy of Sciences, Průhonice, Czech Republic.ORCID https://orcid.org/0000-0002-4101-6223
Lucas da Silva CostaDepartamento de Biologia, Centro de Genética e Biologia Molecular, Universidade Estadual de Santa Cruz, Ilhéus, Bahia, Brazil.ORCID https://orcid.org/0000-0002-4463-3139
Claudia Fortes FerreiraEmbrapa Mandioca e Fruticultura, Cruz das Almas, Bahia, Brazil.ORCID https://orcid.org/0000-0001-5476-2236
Soares FilhoEmbrapa Mandioca e Fruticultura, Cruz das Almas, Bahia, Brazil.
Fabienne MicheliDepartamento de Biologia, Centro de Genética e Biologia Molecular, Universidade Estadual de Santa Cruz, Ilhéus, Bahia, Brazil.ORCID https://orcid.org/0000-0002-9031-362X
Maurício Antônio Coelho-FilhoEmbrapa Mandioca e Fruticultura, Cruz das Almas, Bahia, Brazil.ORCID https://orcid.org/0000-0002-4667-5535
Abelmon da Silva GesteiraDepartamento de Biologia, Centro de Genética e Biologia Molecular, Universidade Estadual de Santa Cruz, Ilhéus, Bahia, Brazil.ORCID https://orcid.org/0000-0002-7590-0455

Funding

Brazilian National Council for Scientific and Technological Development (CNPq) 402255/2023-2Fundacão de Amparo à Pesquisa do Estado da Bahia
6 · The paper itself

Abstract

Recurrent drought limits the productivity of perennial crops such as citrus, whose tolerance to water deficit largely depends on scion-rootstock interactions. Although physiological responses to recurrent drought are well documented, the epigenetic states associated with these responses remain poorly understood, limiting the use of epigenetic variation to improve drought resilience. Here, we investigated whole-genome DNA methylation profiles and transcriptional responses in "Pera-D6" sweet orange (LP) grafted onto two rootstocks with contrasting physiological strategies for coping with water deficit: "Rangpur" lime (RL), associated with dehydration avoidance through enhanced water acquisition, and "Sunki Maravilha" mandarin (SM), associated with tighter regulation of transpiration and physiological adjustments under stress. Grafted plants were exposed to three cycles of water deficit followed by rehydration. In the scion, we detected rootstock-dependent methylation dynamics, with LP/RL exhibiting broader patterns of methylation change and LP/SM showing a more targeted response. In the LP/SM combination, drought-associated differentially methylated regions were linked to genes involved in photosynthesis, stomatal regulation, and transcriptional processes. For several stress-responsive genes, promoter methylation changes coincided with qualitative trends in gene expression; however, no significant methylation-expression correlations were detected after multiple-testing correction. These findings indicate that recurrent drought is associated with rootstock-dependent persistent DNA methylation patterns with potential functional relevance. Overall, the results highlight the importance of considering epigenetic variation in studies of drought response and suggest that rootstock selection may play a role in shaping regulatory responses to water deficit in citrus.

Indexed as

CitrusEpigenesis, GeneticPlant RootsDNA MethylationDrought ResistanceDroughtsGene Expression Regulation, PlantStress, Physiologicalcitrus resilienceDMRsDNA methylationdrought stress memoryepigenetic regulationrootstock‐scion interactionsWGBS

Identifiers

PMID42772734
PMCPMC13597148

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.