Evidence map›Paper›PMID 42758746›Full record

ArticlePloS one2026

Integrated analysis of transcriptomic and proteomic profiles identifies divergent regulatory networks for intramuscular fat in Chinese versus Western Pigs.

Caoyan Xu, Pengcheng Shen, Chang Sheng Jiang, Ahmed H Ghonaim, Man Ren, Xiaojin Li, Qianqian Hu, Chonglong Wang

Abstract read
In one paragraph

Article in PloS one, 2026. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

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0citing papers in PubMed
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1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

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Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors.

Caoyan XuCollege of Animal Science, Anhui Science and Technology University, Chuzhou, China.
Pengcheng ShenCollege of Animal Science, Anhui Science and Technology University, Chuzhou, China.ORCID https://orcid.org/0009-0002-8216-836X
Chang Sheng JiangCollege of Animal Science, Anhui Science and Technology University, Chuzhou, China.
Ahmed H GhonaimNational Key Laboratory of Agricultural Microbiology, College of Veterinary Medicine, Huazhong Agricultural University, Wuhan, China.
Man RenCollege of Animal Science, Anhui Science and Technology University, Chuzhou, China.
Xiaojin LiCollege of Animal Science, Anhui Science and Technology University, Chuzhou, China.
Qianqian HuCollege of Animal Science, Anhui Science and Technology University, Chuzhou, China.
Chonglong WangInstitute of Animal Husbandry and Veterinary Medicine, Anhui Academy of Agricultural Sciences, Hefei, China.ORCID https://orcid.org/0000-0003-3750-0511

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Intramuscular fat (IMF) content is a key determinant of pork quality. In this study, the Chinese indigenous Huai pig (a fat-type breed) and the Western Duroc pig (a lean-type breed) were selected to investigate the molecular mechanisms underlying IMF deposition. Proteomic analysis identified 91 differentially expressed proteins (DEPs) between the two breeds. Gene Ontology (GO) and Kyoto Encyclopedia of Genes and Genomes (KEGG) enrichment analyses revealed that several key lipid metabolism-related pathways were significantly enriched, including the Lipid metabolic process, AMPK signaling pathway, nicotinate and nicotinamide metabolism, and Fat digestion and absorption. Western blotting further confirmed the reliability of the proteomic results. Integrated transcriptomic and proteomic analyses highlighted significant enrichment of the PPAR signaling pathway, which plays a central role in lipid metabolism. These findings suggest that enhanced fatty-acid uptake contributes to increased lipid deposition in muscle tissue. Additionally, several potential candidate genes associated with IMF deposition were identified, including CD36, SCARB2, ACADVL, ACADSB, ACADM, UNC119B, PAS-4, and APOA1. Collectively, this study provides valuable insights into the molecular regulation of IMF deposition in pigs and offers a theoretical basis and genetic resources for improving pork quality and advancing molecular breeding.

Indexed as

Adipose TissueGene Regulatory NetworksMuscle, SkeletalProteomeProteomicsTranscriptomeAnimalsBreedingGene Expression ProfilingLipid MetabolismSignal TransductionSwineProteome

Identifiers

PMID42758746
PMCPMC13588535

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.