Evidence map›Paper›PMID 42752885›Full record

ReviewSub-cellular biochemistry2026

Water Under Molecular Crowding: From Femtosecond H-Bond Networks Dynamics to Biological Function.

Xiao You

Abstract readReview
PubMed Publisher
In one paragraph

Review in Sub-cellular biochemistry, 2026. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

1 author.

Xiao YouCenter of Synthetic Biology and Integrated Bioengineering, Westlake University, Hangzhou, Zhejiang, China. youxiao@westlake.edu.cn.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Cells are densely packed with macromolecules, creating a crowded environment that fundamentally alters water's hydrogen bond (H-bond) networks. H-bond networks, typically dynamic and tetrahedral in bulk water, are disrupted by macromolecular surfaces, confinement, and competitive solute interactions. Subtle shifts in H-bond lifetimes, connectivity, and reorientation dynamics cascade into large-scale biological consequences-modulating protein folding, enzymatic function, and liquid-liquid phase separation. This chapter highlights how recent advances in time-resolved vibrational spectroscopy (e.g., 2D IR) and molecular dynamics (MD) simulations unravel crowding's effects on water structure and dynamics. Emphasis is placed on how these techniques elucidate interfacial water's heterogeneous and slowed dynamics in cytoplasm-like environments, at membrane surfaces, and within membraneless biomolecular condensates. We discuss how these dynamic perturbations reshape free energy landscapes and modulate biomolecular function. Finally, the chapter proposes integrative frameworks to connect ultrafast spectroscopic and simulation data with mesoscale biophysical models. Such multiscale approaches are essential to capture the full implications of hydration under crowding, offering a pathway to understand how life is organized at the molecular level in its physiologically crowded native state.

Indexed as

Molecular Dynamics SimulationWaterHydrogen BondingPhase SeparationProtein FoldingWater2D IRBiocondensatesHydrogen bond networksMacromolecular crowdingMembrane hydrationMolecular dynamics simulationsPhase separationTime-resolved vibrational spectroscopy

Identifiers

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.