Evidence map›Paper›PMID 42752828›Full record

ArticleThe oncologist2026

Genomic and transcriptomic correlates of deep prostate-specific antigen response in patients with metastatic androgen pathway modulation-sensitive prostate cancer.

Rana R McKay, Deepak Kilari, Binyam Yilma, Unnati Jariwala, Arya Ashok, Stamatina Fragkogianni, Jacob Mercer, Neeraj Agarwal, Emmanuel S Antonarakis

Abstract read
In one paragraph

Article in The oncologist, 2026. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

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1 · What the graph read from it

What it found

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The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

9 authors.

Rana R McKayMoores Cancer Center, University of California San Diego, La Jolla, CA 92093, United States.ORCID 0000-0002-0581-7963
Deepak KilariDepartment of Medicine, Medical College of Wisconsin, Milwaukee, WI 53226, United States.
Binyam YilmaTempus AI, Inc, Chicago, IL 60654, United States.ORCID 0009-0007-8845-5390
Unnati JariwalaTempus AI, Inc, Chicago, IL 60654, United States.
Arya AshokTempus AI, Inc, Chicago, IL 60654, United States.
Stamatina FragkogianniTempus AI, Inc, Chicago, IL 60654, United States.
Jacob MercerTempus AI, Inc, Chicago, IL 60654, United States.
Neeraj AgarwalDepartment of Internal Medicine, University of Utah, Salt Lake City, UT 84112, United States.ORCID 0000-0003-1076-0428
Emmanuel S AntonarakisDepartment of Medicine, Masonic Cancer Center, University of Minnesota, Minneapolis, MN 55455, United States.ORCID 0000-0003-0031-9655

Funding

VIRAL MALIGNANCYP30CA023100 · NCI · UNIVERSITY OF CALIFORNIA, SAN DIEGO · PI Jesse Nodora · 1985 to 2026
$124.9M
Cancer Center Support Grant awarded to the UC San Diego Moores Cancer Center 2P30CA023100-38National Cancer Institute of the National Institutes of HealthNCI NIH HHS P30 CA023100
6 · The paper itself

Abstract

backgroundDespite advances in metastatic androgen pathway modulation-sensitive prostate cancer (mAPMS) treatment, outcomes remain heterogeneous. Achieving a post-treatment undetectable prostate-specific antigen (PSA) is a strong prognostic marker. We aimed to identify genomic and transcriptomic determinants of PSA response in a real-world clinical-genomic cohort. PATIENTS AND

methodsPatients with mAPMS who underwent DNA (Tempus xT) and, in a subset, RNA (Tempus xR) sequencing were identified from the Tempus Lens database. Inclusion required stage IV disease within 90 days of sample collection and obtained within 12 months before or 3 months after treatment initiation. Patients with PSA at 6 months (n = 525) were classified as PSA-Low (<0.1 ng/mL, n = 240) or PSA-High (≥0.1 ng/mL, n = 285). Overall survival (OS) was assessed by 6-month landmark analysis with delayed-entry adjustment. Logistic and Cox models were adjusted for clinical variables. Sensitivity analyses used a relative definition of >95% PSA decline from baseline.

resultsBaseline PSA was lower in PSA-Low versus PSA-High patients (24 vs 36 ng/mL, P = .01). SPOP (17% vs 11%) and ZFHX3 (2.5% vs 6%) alterations differed between groups, but neither persisted after adjustment. Using the relative definition, ZMYM3 and JAK1 alterations were independently associated with failure to achieve a deep PSA response. Expression of PSMA, TROP2, B7-H3, and STEAP1 did not differ between groups. PSA-Low status was independently associated with improved OS, as was deep relative response.

conclusionDeep PSA response at 6 months correlates with improved OS in mAPMS. Integrating molecular markers with PSA response may inform treatment intensification or de-escalation strategies.

Indexed as

AndrogensProstate-Specific AntigenProstatic NeoplasmsAgedBiomarkers, TumorGenomicsHumansMaleMiddle AgedNeoplasm MetastasisPrognosisTranscriptomeAndrogensBiomarkers, TumorProstate-Specific Antigenbiomarkershormone sensitivemolecular correlatesprognosisPSA nadirPSA response

Identifiers

PMID42752828
PMCPMC13653217

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Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.