Evidence map›Paper›PMID 42741572›Full record

ReviewiScience2026

Beyond predictive accuracy: A case for mechanism-informed, uncertainty-aware machine learning in food microbiology.

Youssef Ezzaky, Elgin Ee Lin Yap, Wei Ning Chen

Abstract readReview
In one paragraph

Review in iScience, 2026. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

3 authors.

Youssef EzzakyFuture Ready Food Safety Hub, Nanyang Technological University, 50 Nanyang Avenue, N1-B3C-41, Singapore 639798, Singapore.
Elgin Ee Lin YapFuture Ready Food Safety Hub, Nanyang Technological University, 50 Nanyang Avenue, N1-B3C-41, Singapore 639798, Singapore.
Wei Ning ChenFuture Ready Food Safety Hub, Nanyang Technological University, 50 Nanyang Avenue, N1-B3C-41, Singapore 639798, Singapore.

Funding

No grant is acknowledged in the PubMed record.

6 · The paper itself

Abstract

Foodborne illness and avoidable food waste both depend on decisions about how microorganisms behave in a food. Machine-learning (ML) models can achieve strong predictive accuracy within a defined data domain, but a held-out test error alone does not establish reliability for food-safety decisions. Conventional predictive-microbiology models are usually empirical rather than fully mechanistic, although their parameters have biological interpretation; ML offers flexible learning of complex, high-dimensional relationships. Mechanism-informed hybrids can incorporate kinetic or physiological constraints within a learning workflow. Such constraints may improve plausibility, data efficiency, and interpretability within a declared applicability domain, but they do not confer universal or unrestricted extrapolation. We outline four hybrid design patterns and propose a food-specific validation framework that includes context-relevant external validation, calibrated predictive uncertainty, and decision-focused evaluation.

Indexed as

decision supportexternal validationfood safetyhybrid modelingmachine learningmicrobial kineticsmodel calibrationpredictive microbiologyuncertainty quantification

Identifiers

PMID42741572
PMCPMC13573004

What OpenQuestion holds

Textmetadata
Read underepoch 390

Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.