Evidence map›Paper›PMID 42737438›Full record

ArticleInternational journal of molecular sciences2026

Integrated Transcriptomic Analyses Identify Four Prognosis-Associated Genes in Hepatocellular Carcinoma.

Yuxian Liu, Xingjie Chen, Junyuan Zhang, Xueyan Zhou, Xiaohui Li, Kangcheng Xu, Hao Lin, Yanni Cao

Abstract read
In one paragraph

Article in International journal of molecular sciences, 2026. The graph could read no effect estimate from its abstract, so it casts no vote on the map. Not yet cited in PubMed.

0numbers the graph read from it
0cells of the map it votes in
0citing papers in PubMed
–field-weighted citation impact
1 · What the graph read from it

What it found

Each row is one number read from the abstract, on the scale the paper reported it, with its interval. Left of the dashed line favours the treatment, right favours the comparator. Under each row is the sentence it came from. New to these charts? A ten-minute tutorial.

The abstract states no effect estimate the extractor could read, or names no intervention and outcome on the map, so this paper lights no cell and moves no belief. It is still indexed, cited and linked below.

2 · The registry

The trial behind it

Trials whose registry record cites this paper, or whose number appears in the abstract. A trial that started after this paper was published is citing it as background, not reporting it.

Neither the registry nor the abstract names a trial number. If this is a trial report, that itself is worth knowing.

3 · Its place in the literature

Who cites it

0 citing papers in PubMed.

No citing paper in PubMed yet.

4 · The record

Corrections and comments

PubMed lists nothing against this paper. Absence here is not a guarantee, only a check that was made.

5 · Who and what money

Authors and funding

8 authors.

Yuxian LiuSchool of Artificial Intelligence, Anhui University of Science & Technology, Huainan 232001, China.ORCID 0000-0003-1458-9648
Xingjie ChenSchool of Artificial Intelligence, Anhui University of Science & Technology, Huainan 232001, China.
Junyuan ZhangSchool of Artificial Intelligence, Anhui University of Science & Technology, Huainan 232001, China.
Xueyan ZhouSchool of Artificial Intelligence, Anhui University of Science & Technology, Huainan 232001, China.
Xiaohui LiSchool of Artificial Intelligence, Anhui University of Science & Technology, Huainan 232001, China.
Kangcheng XuSchool of Artificial Intelligence, Anhui University of Science & Technology, Huainan 232001, China.
Hao LinKey Laboratory for Neuro-Information of Ministry of Education, Center for Informational Biology, School of Life Sciences and Technology, University of Electronic Science and Technology of China, Chengdu 611731, China.ORCID 0000-0001-6265-2862
Yanni CaoSchool of Artificial Intelligence, Anhui University of Science & Technology, Huainan 232001, China.ORCID 0000-0003-1508-4131

Funding

National Natural Science Foundation of China 62501014National Natural Science Foundation of China 62502005Natural Science Research Project of Anhui Educational Committee 2023AH051200Natural Science Research Project of Anhui Educational Committee 2023AH051201
6 · The paper itself

Abstract

Hepatocellular carcinoma (HCC) is one of the malignant tumors with high incidence and mortality rates worldwide. Given the poor prognosis of patients with HCC, it is crucial to explore the molecular mechanisms underlying HCC development and to evaluate prognostic markers. Differential expression analysis followed by univariate Cox, LASSO, and multivariate Cox regression identified four genes (EPO, SOCS2, IL18RAP, and KPNA2), and a Cox-based risk score was evaluated in the TCGA-LIHC cohort and externally in GSE14520 using Kaplan-Meier and time-dependent ROC analyses. Bulk, single-cell, and protein resources provided convergent expression context. Survival machine-learning analysis using observed overall-survival time and censoring status identified Cox-Ridge as the best-performing model in TCGA-LIHC, with more modest performance in GSE14520, and immune profiling revealed risk-group-associated differences in estimated immune and stromal components, immune-cell composition, and immune-checkpoint expression. The oncoPredict/GDSC2 screen highlighted five potential drug candidates for experimental prioritization. Because the drug screen is based on computationally predicted sensitivities, these findings should be regarded as hypothesis-generating and require validation in prospective cohorts and experimental systems before clinical translation.

Indexed as

Biomarkers, TumorCarcinoma, HepatocellularGene Expression ProfilingLiver NeoplasmsTranscriptomeGene Expression Regulation, NeoplasticHumansPrognosisBiomarkers, Tumorclinicaldruggene expressionhepatocellular carcinomaimmune microenvironmentmachine learningprognosis

Identifiers

PMID42737438
PMCPMC13566057

What OpenQuestion holds

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Registered trials

None linked

Read under generation 80e0d062 · epoch 390. Bibliography from PubMed, PubMed Central and OpenAlex; grants from NIH RePORTER; trial links from ClinicalTrials.gov; estimates, votes and beliefs from the OpenQuestion graph.